Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRF2Q9HAW0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRF2Q9HAW0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
BRF2Q9HAW0 KRT17P1-201ENST00000399211 1546 ntBASIC19.16■□□□□ 0.66
BRF2Q9HAW0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.16■□□□□ 0.66
BRF2Q9HAW0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.16■□□□□ 0.66
BRF2Q9HAW0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRF2Q9HAW0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRF2Q9HAW0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRF2Q9HAW0 HLA-G-202ENST00000376815 851 ntBASIC19.16■□□□□ 0.66
BRF2Q9HAW0 HLA-G-203ENST00000376818 1127 ntBASIC19.16■□□□□ 0.66
BRF2Q9HAW0 AC023632.3-201ENST00000521633 145 ntBASIC19.16■□□□□ 0.66
BRF2Q9HAW0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.16■□□□□ 0.66
BRF2Q9HAW0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.16■□□□□ 0.66
BRF2Q9HAW0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRF2Q9HAW0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRF2Q9HAW0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.16■□□□□ 0.66
BRF2Q9HAW0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRF2Q9HAW0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BRF2Q9HAW0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
BRF2Q9HAW0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
BRF2Q9HAW0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRF2Q9HAW0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
BRF2Q9HAW0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRF2Q9HAW0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
BRF2Q9HAW0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BRF2Q9HAW0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRF2Q9HAW0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRF2Q9HAW0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRF2Q9HAW0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.15■□□□□ 0.66
BRF2Q9HAW0 AC026185.1-201ENST00000445748 174 ntBASIC19.15■□□□□ 0.66
BRF2Q9HAW0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRF2Q9HAW0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.15■□□□□ 0.66
BRF2Q9HAW0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
BRF2Q9HAW0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRF2Q9HAW0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRF2Q9HAW0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BRF2Q9HAW0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.15■□□□□ 0.66
BRF2Q9HAW0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.15■□□□□ 0.66
BRF2Q9HAW0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.15■□□□□ 0.66
BRF2Q9HAW0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
BRF2Q9HAW0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
BRF2Q9HAW0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BRF2Q9HAW0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRF2Q9HAW0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRF2Q9HAW0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.14■□□□□ 0.65
BRF2Q9HAW0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
BRF2Q9HAW0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRF2Q9HAW0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.14■□□□□ 0.65
BRF2Q9HAW0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRF2Q9HAW0 AF201337.1-201ENST00000520239 748 ntBASIC19.14■□□□□ 0.65
BRF2Q9HAW0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.14■□□□□ 0.65
BRF2Q9HAW0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.14■□□□□ 0.65
BRF2Q9HAW0 RAP2CP1-201ENST00000605103 478 ntBASIC19.14■□□□□ 0.65
BRF2Q9HAW0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BRF2Q9HAW0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BRF2Q9HAW0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BRF2Q9HAW0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.14■□□□□ 0.65
BRF2Q9HAW0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BRF2Q9HAW0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BRF2Q9HAW0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRF2Q9HAW0 LSM12P1-201ENST00000411836 588 ntBASIC19.13■□□□□ 0.65
BRF2Q9HAW0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
BRF2Q9HAW0 AL050303.2-201ENST00000619798 666 ntBASIC19.13■□□□□ 0.65
BRF2Q9HAW0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRF2Q9HAW0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
BRF2Q9HAW0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BRF2Q9HAW0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
BRF2Q9HAW0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRF2Q9HAW0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.13■□□□□ 0.65
BRF2Q9HAW0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BRF2Q9HAW0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.13■□□□□ 0.65
BRF2Q9HAW0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.13■□□□□ 0.65
BRF2Q9HAW0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRF2Q9HAW0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRF2Q9HAW0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRF2Q9HAW0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRF2Q9HAW0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.12■□□□□ 0.65
BRF2Q9HAW0 AC009237.14-201ENST00000609975 1594 ntBASIC19.12■□□□□ 0.65
BRF2Q9HAW0 MKRN4P-201ENST00000444706 1521 ntBASIC19.12■□□□□ 0.65
BRF2Q9HAW0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRF2Q9HAW0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRF2Q9HAW0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.12■□□□□ 0.65
BRF2Q9HAW0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms