Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CMSS1Q9BQ75 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CMSS1Q9BQ75 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.06■□□□□ 0.32
CMSS1Q9BQ75 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.06■□□□□ 0.32
CMSS1Q9BQ75 AL139246.5-201ENST00000606645 996 ntBASIC17.06■□□□□ 0.32
CMSS1Q9BQ75 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CMSS1Q9BQ75 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CMSS1Q9BQ75 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CMSS1Q9BQ75 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CMSS1Q9BQ75 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.06■□□□□ 0.32
CMSS1Q9BQ75 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CMSS1Q9BQ75 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CMSS1Q9BQ75 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CMSS1Q9BQ75 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CMSS1Q9BQ75 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CMSS1Q9BQ75 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.06■□□□□ 0.32
CMSS1Q9BQ75 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CMSS1Q9BQ75 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 LINC02228-203ENST00000641970 1355 ntBASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 AC027612.3-201ENST00000413684 1047 ntBASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 CCDC92B-201ENST00000575506 885 ntBASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CMSS1Q9BQ75 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 DPP3P2-201ENST00000416030 1696 ntBASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 AC007322.3-201ENST00000426526 701 ntBASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 KRT8P36-201ENST00000489121 1440 ntBASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CMSS1Q9BQ75 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CMSS1Q9BQ75 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CMSS1Q9BQ75 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CMSS1Q9BQ75 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CMSS1Q9BQ75 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CMSS1Q9BQ75 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CMSS1Q9BQ75 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CMSS1Q9BQ75 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CMSS1Q9BQ75 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CMSS1Q9BQ75 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.03■□□□□ 0.32
CMSS1Q9BQ75 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CMSS1Q9BQ75 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CMSS1Q9BQ75 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CMSS1Q9BQ75 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.03■□□□□ 0.32
CMSS1Q9BQ75 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CMSS1Q9BQ75 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.03■□□□□ 0.32
CMSS1Q9BQ75 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.03■□□□□ 0.32
CMSS1Q9BQ75 KRT18P20-201ENST00000548986 1279 ntBASIC17.03■□□□□ 0.32
CMSS1Q9BQ75 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.03■□□□□ 0.32
CMSS1Q9BQ75 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.03■□□□□ 0.32
CMSS1Q9BQ75 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CMSS1Q9BQ75 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CMSS1Q9BQ75 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CMSS1Q9BQ75 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CMSS1Q9BQ75 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CMSS1Q9BQ75 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CMSS1Q9BQ75 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CMSS1Q9BQ75 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CMSS1Q9BQ75 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.02■□□□□ 0.32
CMSS1Q9BQ75 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CMSS1Q9BQ75 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CMSS1Q9BQ75 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CMSS1Q9BQ75 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms