Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.68■□□□□ 0.9
CSPG4P5Q96PW8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSPG4P5Q96PW8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSPG4P5Q96PW8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.68■□□□□ 0.9
CSPG4P5Q96PW8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.67■□□□□ 0.9
CSPG4P5Q96PW8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSPG4P5Q96PW8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSPG4P5Q96PW8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.67■□□□□ 0.9
CSPG4P5Q96PW8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.67■□□□□ 0.9
CSPG4P5Q96PW8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSPG4P5Q96PW8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.67■□□□□ 0.9
CSPG4P5Q96PW8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSPG4P5Q96PW8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.67■□□□□ 0.9
CSPG4P5Q96PW8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.67■□□□□ 0.9
CSPG4P5Q96PW8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.67■□□□□ 0.9
CSPG4P5Q96PW8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.67■□□□□ 0.9
CSPG4P5Q96PW8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSPG4P5Q96PW8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSPG4P5Q96PW8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSPG4P5Q96PW8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSPG4P5Q96PW8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSPG4P5Q96PW8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSPG4P5Q96PW8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSPG4P5Q96PW8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSPG4P5Q96PW8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CSPG4P5Q96PW8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSPG4P5Q96PW8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSPG4P5Q96PW8 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.66■□□□□ 0.9
CSPG4P5Q96PW8 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.66■□□□□ 0.9
CSPG4P5Q96PW8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.66■□□□□ 0.9
CSPG4P5Q96PW8 AC091874.3-201ENST00000512672 1195 ntBASIC20.66■□□□□ 0.9
CSPG4P5Q96PW8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CSPG4P5Q96PW8 AL138781.1-201ENST00000566567 1274 ntBASIC20.66■□□□□ 0.9
CSPG4P5Q96PW8 AL109923.1-201ENST00000618799 583 ntBASIC20.66■□□□□ 0.9
CSPG4P5Q96PW8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSPG4P5Q96PW8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSPG4P5Q96PW8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.66■□□□□ 0.9
CSPG4P5Q96PW8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSPG4P5Q96PW8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.66■□□□□ 0.9
CSPG4P5Q96PW8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CSPG4P5Q96PW8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CSPG4P5Q96PW8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSPG4P5Q96PW8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 HLA-G-202ENST00000376815 851 ntBASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 HLA-G-203ENST00000376818 1127 ntBASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 AC098934.4-201ENST00000564127 592 ntBASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 MIR4758-201ENST00000577688 71 ntBASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CSPG4P5Q96PW8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.64■□□□□ 0.9
CSPG4P5Q96PW8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CSPG4P5Q96PW8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
CSPG4P5Q96PW8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.64■□□□□ 0.89
CSPG4P5Q96PW8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.64■□□□□ 0.89
CSPG4P5Q96PW8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CSPG4P5Q96PW8 AC104771.1-201ENST00000603335 964 ntBASIC20.64■□□□□ 0.89
CSPG4P5Q96PW8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
CSPG4P5Q96PW8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.64■□□□□ 0.89
CSPG4P5Q96PW8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CSPG4P5Q96PW8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CSPG4P5Q96PW8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CSPG4P5Q96PW8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CSPG4P5Q96PW8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CSPG4P5Q96PW8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CSPG4P5Q96PW8 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.63■□□□□ 0.89
CSPG4P5Q96PW8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSPG4P5Q96PW8 KRT16P6-202ENST00000425692 1426 ntBASIC20.63■□□□□ 0.89
CSPG4P5Q96PW8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.63■□□□□ 0.89
CSPG4P5Q96PW8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.63■□□□□ 0.89
CSPG4P5Q96PW8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSPG4P5Q96PW8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.63■□□□□ 0.89
CSPG4P5Q96PW8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.63■□□□□ 0.89
CSPG4P5Q96PW8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSPG4P5Q96PW8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.63■□□□□ 0.89
CSPG4P5Q96PW8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSPG4P5Q96PW8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.63■□□□□ 0.89
CSPG4P5Q96PW8 MYC-209ENST00000641252 345 ntBASIC20.63■□□□□ 0.89
CSPG4P5Q96PW8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSPG4P5Q96PW8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSPG4P5Q96PW8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSPG4P5Q96PW8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms