Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.9■□□□□ 0.62
COL21A1Q96P44 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL21A1Q96P44 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
COL21A1Q96P44 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
COL21A1Q96P44 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
COL21A1Q96P44 SMG8-203ENST00000578922 2178 ntBASIC18.89■□□□□ 0.62
COL21A1Q96P44 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL21A1Q96P44 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL21A1Q96P44 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL21A1Q96P44 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL21A1Q96P44 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL21A1Q96P44 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.89■□□□□ 0.61
COL21A1Q96P44 AL512625.2-201ENST00000417533 625 ntBASIC18.89■□□□□ 0.61
COL21A1Q96P44 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL21A1Q96P44 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.89■□□□□ 0.61
COL21A1Q96P44 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL21A1Q96P44 AC105036.2-201ENST00000569468 176 ntBASIC18.89■□□□□ 0.61
COL21A1Q96P44 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.89■□□□□ 0.61
COL21A1Q96P44 AL121832.2-201ENST00000610979 668 ntBASIC18.89■□□□□ 0.61
COL21A1Q96P44 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL21A1Q96P44 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.89■□□□□ 0.61
COL21A1Q96P44 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL21A1Q96P44 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL21A1Q96P44 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
COL21A1Q96P44 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL21A1Q96P44 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
COL21A1Q96P44 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
COL21A1Q96P44 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL21A1Q96P44 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
COL21A1Q96P44 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL21A1Q96P44 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.88■□□□□ 0.61
COL21A1Q96P44 NCF1B-203ENST00000435988 1254 ntBASIC18.88■□□□□ 0.61
COL21A1Q96P44 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.88■□□□□ 0.61
COL21A1Q96P44 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.88■□□□□ 0.61
COL21A1Q96P44 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.88■□□□□ 0.61
COL21A1Q96P44 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.88■□□□□ 0.61
COL21A1Q96P44 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.88■□□□□ 0.61
COL21A1Q96P44 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.88■□□□□ 0.61
COL21A1Q96P44 AC100791.3-201ENST00000617619 330 ntBASIC18.88■□□□□ 0.61
COL21A1Q96P44 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.88■□□□□ 0.61
COL21A1Q96P44 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL21A1Q96P44 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.88■□□□□ 0.61
COL21A1Q96P44 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL21A1Q96P44 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL21A1Q96P44 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL21A1Q96P44 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL21A1Q96P44 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.88■□□□□ 0.61
COL21A1Q96P44 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL21A1Q96P44 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
COL21A1Q96P44 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL21A1Q96P44 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL21A1Q96P44 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL21A1Q96P44 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.87■□□□□ 0.61
COL21A1Q96P44 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL21A1Q96P44 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL21A1Q96P44 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
COL21A1Q96P44 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.87■□□□□ 0.61
COL21A1Q96P44 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.87■□□□□ 0.61
COL21A1Q96P44 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.87■□□□□ 0.61
COL21A1Q96P44 AC083906.2-201ENST00000511578 360 ntBASIC18.87■□□□□ 0.61
COL21A1Q96P44 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
COL21A1Q96P44 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL21A1Q96P44 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.87■□□□□ 0.61
COL21A1Q96P44 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL21A1Q96P44 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.87■□□□□ 0.61
COL21A1Q96P44 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.87■□□□□ 0.61
COL21A1Q96P44 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.87■□□□□ 0.61
COL21A1Q96P44 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL21A1Q96P44 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL21A1Q96P44 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL21A1Q96P44 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL21A1Q96P44 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL21A1Q96P44 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL21A1Q96P44 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL21A1Q96P44 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL21A1Q96P44 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.86■□□□□ 0.61
COL21A1Q96P44 GPX1P1-201ENST00000388829 606 ntBASIC18.86■□□□□ 0.61
COL21A1Q96P44 MCRIP2P1-201ENST00000394346 511 ntBASIC18.86■□□□□ 0.61
COL21A1Q96P44 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.86■□□□□ 0.61
COL21A1Q96P44 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.86■□□□□ 0.61
COL21A1Q96P44 AC093787.1-201ENST00000450396 207 ntBASIC18.86■□□□□ 0.61
COL21A1Q96P44 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL21A1Q96P44 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL21A1Q96P44 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL21A1Q96P44 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.86■□□□□ 0.61
COL21A1Q96P44 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL21A1Q96P44 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.85■□□□□ 0.61
COL21A1Q96P44 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.85■□□□□ 0.61
COL21A1Q96P44 CYP21A1P-202ENST00000354927 1481 ntBASIC18.85■□□□□ 0.61
COL21A1Q96P44 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.85■□□□□ 0.61
COL21A1Q96P44 AC010980.2-201ENST00000587099 1412 ntBASIC18.85■□□□□ 0.61
COL21A1Q96P44 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.85■□□□□ 0.61
COL21A1Q96P44 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
COL21A1Q96P44 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL21A1Q96P44 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL21A1Q96P44 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL21A1Q96P44 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.85■□□□□ 0.61
COL21A1Q96P44 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.85■□□□□ 0.61
COL21A1Q96P44 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.85■□□□□ 0.61
COL21A1Q96P44 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms