Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
LMO3Q8TAP4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.03
LMO3Q8TAP4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
LMO3Q8TAP4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.52■■□□□ 1.03
LMO3Q8TAP4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
LMO3Q8TAP4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
LMO3Q8TAP4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.51■■□□□ 1.03
LMO3Q8TAP4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LMO3Q8TAP4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.51■■□□□ 1.03
LMO3Q8TAP4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
LMO3Q8TAP4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LMO3Q8TAP4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LMO3Q8TAP4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.51■■□□□ 1.03
LMO3Q8TAP4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LMO3Q8TAP4 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.51■■□□□ 1.03
LMO3Q8TAP4 AC098934.4-201ENST00000564127 592 ntBASIC21.51■■□□□ 1.03
LMO3Q8TAP4 AL138781.1-201ENST00000566567 1274 ntBASIC21.51■■□□□ 1.03
LMO3Q8TAP4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.51■■□□□ 1.03
LMO3Q8TAP4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LMO3Q8TAP4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
LMO3Q8TAP4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LMO3Q8TAP4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
LMO3Q8TAP4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LMO3Q8TAP4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
LMO3Q8TAP4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
LMO3Q8TAP4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LMO3Q8TAP4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LMO3Q8TAP4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LMO3Q8TAP4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LMO3Q8TAP4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LMO3Q8TAP4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
LMO3Q8TAP4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LMO3Q8TAP4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LMO3Q8TAP4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LMO3Q8TAP4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LMO3Q8TAP4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LMO3Q8TAP4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.5■■□□□ 1.03
LMO3Q8TAP4 SLC29A4P1-201ENST00000398760 971 ntBASIC21.5■■□□□ 1.03
LMO3Q8TAP4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.5■■□□□ 1.03
LMO3Q8TAP4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.5■■□□□ 1.03
LMO3Q8TAP4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LMO3Q8TAP4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
LMO3Q8TAP4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.5■■□□□ 1.03
LMO3Q8TAP4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.5■■□□□ 1.03
LMO3Q8TAP4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.5■■□□□ 1.03
LMO3Q8TAP4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
LMO3Q8TAP4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LMO3Q8TAP4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
LMO3Q8TAP4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 KRT16P6-202ENST00000425692 1426 ntBASIC21.49■■□□□ 1.03
LMO3Q8TAP4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.49■■□□□ 1.03
LMO3Q8TAP4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LMO3Q8TAP4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.48■■□□□ 1.03
LMO3Q8TAP4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LMO3Q8TAP4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
LMO3Q8TAP4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.48■■□□□ 1.03
LMO3Q8TAP4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LMO3Q8TAP4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LMO3Q8TAP4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LMO3Q8TAP4 HLA-G-202ENST00000376815 851 ntBASIC21.48■■□□□ 1.03
LMO3Q8TAP4 HLA-G-203ENST00000376818 1127 ntBASIC21.48■■□□□ 1.03
LMO3Q8TAP4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
LMO3Q8TAP4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.48■■□□□ 1.03
LMO3Q8TAP4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
LMO3Q8TAP4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.48■■□□□ 1.03
LMO3Q8TAP4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.48■■□□□ 1.03
LMO3Q8TAP4 AC104771.1-201ENST00000603335 964 ntBASIC21.48■■□□□ 1.03
LMO3Q8TAP4 AL109923.1-201ENST00000618799 583 ntBASIC21.48■■□□□ 1.03
LMO3Q8TAP4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LMO3Q8TAP4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LMO3Q8TAP4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LMO3Q8TAP4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LMO3Q8TAP4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.47■■□□□ 1.03
LMO3Q8TAP4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
LMO3Q8TAP4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LMO3Q8TAP4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LMO3Q8TAP4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
LMO3Q8TAP4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms