Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH1Q08174 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH1Q08174 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDH1Q08174 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDH1Q08174 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDH1Q08174 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PCDH1Q08174 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDH1Q08174 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH1Q08174 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDH1Q08174 TMEM179-206ENST00000616017 1645 ntBASIC19.32■□□□□ 0.68
PCDH1Q08174 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH1Q08174 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PCDH1Q08174 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH1Q08174 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH1Q08174 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH1Q08174 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH1Q08174 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH1Q08174 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH1Q08174 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH1Q08174 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH1Q08174 AL391422.3-201ENST00000603791 2761 ntBASIC19.31■□□□□ 0.68
PCDH1Q08174 AL691432.2-201ENST00000607222 2038 ntBASIC19.31■□□□□ 0.68
PCDH1Q08174 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.31■□□□□ 0.68
PCDH1Q08174 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDH1Q08174 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDH1Q08174 AC105036.2-201ENST00000569468 176 ntBASIC19.31■□□□□ 0.68
PCDH1Q08174 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDH1Q08174 KRT8P20-201ENST00000423953 1409 ntBASIC19.31■□□□□ 0.68
PCDH1Q08174 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH1Q08174 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH1Q08174 MKRN4P-201ENST00000444706 1521 ntBASIC19.3■□□□□ 0.68
PCDH1Q08174 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH1Q08174 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH1Q08174 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PCDH1Q08174 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH1Q08174 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH1Q08174 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH1Q08174 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDH1Q08174 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH1Q08174 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH1Q08174 MIR663A-201ENST00000385250 93 ntBASIC19.3■□□□□ 0.68
PCDH1Q08174 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH1Q08174 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDH1Q08174 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PCDH1Q08174 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDH1Q08174 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDH1Q08174 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH1Q08174 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDH1Q08174 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH1Q08174 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH1Q08174 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PCDH1Q08174 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDH1Q08174 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH1Q08174 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH1Q08174 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH1Q08174 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PCDH1Q08174 AC112907.3-201ENST00000577781 2400 ntBASIC19.3■□□□□ 0.68
PCDH1Q08174 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH1Q08174 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH1Q08174 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH1Q08174 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH1Q08174 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH1Q08174 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH1Q08174 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH1Q08174 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDH1Q08174 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDH1Q08174 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDH1Q08174 AL121832.2-201ENST00000610979 668 ntBASIC19.29■□□□□ 0.68
PCDH1Q08174 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDH1Q08174 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH1Q08174 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH1Q08174 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH1Q08174 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH1Q08174 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH1Q08174 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH1Q08174 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDH1Q08174 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH1Q08174 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PCDH1Q08174 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH1Q08174 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH1Q08174 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH1Q08174 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PCDH1Q08174 LSM12P1-201ENST00000411836 588 ntBASIC19.28■□□□□ 0.68
PCDH1Q08174 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDH1Q08174 NCF1B-203ENST00000435988 1254 ntBASIC19.28■□□□□ 0.68
PCDH1Q08174 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.28■□□□□ 0.68
PCDH1Q08174 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDH1Q08174 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDH1Q08174 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
PCDH1Q08174 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDH1Q08174 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDH1Q08174 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH1Q08174 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH1Q08174 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDH1Q08174 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDH1Q08174 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH1Q08174 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
PCDH1Q08174 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH1Q08174 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDH1Q08174 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms