Protein–RNA interactions for Protein: Q06336

GGA1, ADP-ribosylation factor-binding protein GGA1, yeastyeast

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GGA1Q06336 YAL067W-AYAL067W-A 228 nt0.06□□□□□ -2.4
GGA1Q06336 ISF1YMR081C 1017 nt0.06□□□□□ -2.4
GGA1Q06336 YNR025CYNR025C 360 nt0.06□□□□□ -2.4
GGA1Q06336 YHL046W-AYHL046W-A 327 nt0.05□□□□□ -2.4
GGA1Q06336 YER006C-AYER006C-A 318 nt0.04□□□□□ -2.4
GGA1Q06336 YDL185C-AYDL185C-A 228 nt0.03□□□□□ -2.4
GGA1Q06336 FYV7YLR068W 456 nt0.03□□□□□ -2.4
GGA1Q06336 YOR053WYOR053W 342 nt0.03□□□□□ -2.4
GGA1Q06336 YDR371C-AYDR371C-A 105 nt0.02□□□□□ -2.41
GGA1Q06336 YNL122CYNL122C 348 nt0.02□□□□□ -2.41
GGA1Q06336 SGF11YPL047W 300 nt0.02□□□□□ -2.41
GGA1Q06336 LEE1YPL054W 906 nt0.01□□□□□ -2.41
GGA1Q06336 YCR018C-AYCR018C-A 255 nt0□□□□□ -2.41
GGA1Q06336 YER078W-AYER078W-A 165 nt0□□□□□ -2.41
GGA1Q06336 RPS26AYGL189C 360 nt0□□□□□ -2.41
GGA1Q06336 PCC1YKR095W-A 267 nt0□□□□□ -2.41
GGA1Q06336 YLR101CYLR101C 396 nt-0.01□□□□□ -2.41
GGA1Q06336 TAR1YLR154W-C 375 nt-0.01□□□□□ -2.41
GGA1Q06336 YLR456WYLR456W 615 nt-0.01□□□□□ -2.41
GGA1Q06336 snR190snR190 190 nt-0.01□□□□□ -2.41
GGA1Q06336 NNF2YGR089W 2811 nt-0.02□□□□□ -2.41
GGA1Q06336 YNL303WYNL303W 348 nt-0.02□□□□□ -2.41
GGA1Q06336 MRPL50YNR022C 420 nt-0.02□□□□□ -2.41
GGA1Q06336 YOR186C-AYOR186C-A 210 nt-0.02□□□□□ -2.41
GGA1Q06336 YPL068CYPL068C 882 nt-0.02□□□□□ -2.41
GGA1Q06336 YPL225WYPL225W 441 nt-0.02□□□□□ -2.41
GGA1Q06336 snR41snR41 95 nt-0.02□□□□□ -2.41
GGA1Q06336 tN(GUU)QtN(GUU)Q 71 nt-0.03□□□□□ -2.41
GGA1Q06336 TOM22YNL131W 459 nt-0.03□□□□□ -2.41
GGA1Q06336 YNL146WYNL146W 303 nt-0.03□□□□□ -2.41
GGA1Q06336 YLR334CYLR334C 381 nt-0.04□□□□□ -2.42
GGA1Q06336 COG8YML071C 1824 nt-0.05□□□□□ -2.42
GGA1Q06336 YMR307C-AYMR307C-A 195 nt-0.05□□□□□ -2.42
GGA1Q06336 COY1YKL179C 2040 nt-0.06□□□□□ -2.42
GGA1Q06336 BUL2YML111W 2763 nt-0.07□□□□□ -2.42
GGA1Q06336 ULI1YFR026C 510 nt-0.07□□□□□ -2.42
GGA1Q06336 YHR007C-AYHR007C-A 216 nt-0.07□□□□□ -2.42
GGA1Q06336 YJL120WYJL120W 324 nt-0.07□□□□□ -2.42
GGA1Q06336 YLR232WYLR232W 348 nt-0.07□□□□□ -2.42
GGA1Q06336 RPS25BYLR333C 327 nt-0.07□□□□□ -2.42
GGA1Q06336 SOV1YMR066W 2697 nt-0.07□□□□□ -2.42
GGA1Q06336 NIP1YMR309C 2439 nt-0.08□□□□□ -2.42
GGA1Q06336 SSS1YDR086C 243 nt-0.08□□□□□ -2.42
GGA1Q06336 YEL050W-AYEL050W-A 192 nt-0.08□□□□□ -2.42
GGA1Q06336 QCR9YGR183C 201 nt-0.09□□□□□ -2.42
GGA1Q06336 YOR032W-AYOR032W-A 201 nt-0.1□□□□□ -2.43
GGA1Q06336 YHR138CYHR138C 345 nt-0.11□□□□□ -2.43
GGA1Q06336 YOL013W-BYOL013W-B 291 nt-0.11□□□□□ -2.43
GGA1Q06336 snR45snR45 172 nt-0.11□□□□□ -2.43
GGA1Q06336 YPR092WYPR092W 306 nt-0.13□□□□□ -2.43
GGA1Q06336 YKU70YMR284W 1809 nt-0.14□□□□□ -2.43
GGA1Q06336 RPL35AYDL191W 363 nt-0.14□□□□□ -2.43
GGA1Q06336 YDR210WYDR210W 228 nt-0.14□□□□□ -2.43
GGA1Q06336 YHR131W-AYHR131W-A 246 nt-0.15□□□□□ -2.43
GGA1Q06336 YLL006W-AYLL006W-A 177 nt-0.15□□□□□ -2.43
GGA1Q06336 VPS20YMR077C 666 nt-0.15□□□□□ -2.43
GGA1Q06336 YCR022CYCR022C 345 nt-0.16□□□□□ -2.44
GGA1Q06336 YKL136WYKL136W 399 nt-0.16□□□□□ -2.44
GGA1Q06336 YAR029WYAR029W 225 nt-0.16□□□□□ -2.44
GGA1Q06336 YLR282CYLR282C 342 nt-0.16□□□□□ -2.44
GGA1Q06336 CSN9YDR179C 489 nt-0.18□□□□□ -2.44
GGA1Q06336 YDR354C-AYDR354C-A 144 nt-0.18□□□□□ -2.44
GGA1Q06336 PRP39YML046W 1890 nt-0.18□□□□□ -2.44
GGA1Q06336 YLR434CYLR434C 384 nt-0.19□□□□□ -2.44
GGA1Q06336 YDL158CYDL158C 309 nt-0.2□□□□□ -2.44
GGA1Q06336 YEL073CYEL073C 324 nt-0.2□□□□□ -2.44
GGA1Q06336 YAR053WYAR053W 297 nt-0.21□□□□□ -2.44
GGA1Q06336 ATP19YOL077W-A 207 nt-0.22□□□□□ -2.44
GGA1Q06336 YJL026C-AYJL026C-A 222 nt-0.23□□□□□ -2.45
GGA1Q06336 snR128snR128 126 nt-0.24□□□□□ -2.45
GGA1Q06336 YOR161W-AYOR161W-A 81 nt-0.24□□□□□ -2.45
GGA1Q06336 PRM3YPL192C 402 nt-0.24□□□□□ -2.45
GGA1Q06336 TFB5YDR079C-A 219 nt-0.25□□□□□ -2.45
GGA1Q06336 snR8snR8 190 nt-0.26□□□□□ -2.45
GGA1Q06336 SNU13YEL026W 381 nt-0.29□□□□□ -2.46
GGA1Q06336 YGL123C-AYGL123C-A 231 nt-0.29□□□□□ -2.46
GGA1Q06336 HTB2YBL002W 396 nt-0.29□□□□□ -2.46
GGA1Q06336 YLR406C-AYLR406C-A 150 nt-0.29□□□□□ -2.46
GGA1Q06336 snR46snR46 197 nt-0.29□□□□□ -2.46
GGA1Q06336 BLI1YKL061W 342 nt-0.3□□□□□ -2.46
GGA1Q06336 YLR041WYLR041W 321 nt-0.3□□□□□ -2.46
GGA1Q06336 CSE2YNR010W 450 nt-0.3□□□□□ -2.46
GGA1Q06336 YPL205CYPL205C 345 nt-0.3□□□□□ -2.46
GGA1Q06336 YEL020C-BYEL020C-B 198 nt-0.31□□□□□ -2.46
GGA1Q06336 RPS27BYHR021C 249 nt-0.31□□□□□ -2.46
GGA1Q06336 YKL100W-AYKL100W-A 90 nt-0.31□□□□□ -2.46
GGA1Q06336 YDR366CYDR366C 399 nt-0.32□□□□□ -2.46
GGA1Q06336 YGR164WYGR164W 336 nt-0.32□□□□□ -2.46
GGA1Q06336 CSE1YGL238W 2883 nt-0.32□□□□□ -2.46
GGA1Q06336 YIL115W-AYIL115W-A 372 nt-0.33□□□□□ -2.46
GGA1Q06336 snR189snR189 189 nt-0.33□□□□□ -2.46
GGA1Q06336 YBR072C-AYBR072C-A 162 nt-0.33□□□□□ -2.46
GGA1Q06336 YLR202CYLR202C 327 nt-0.34□□□□□ -2.46
GGA1Q06336 SBH2YER019C-A 267 nt-0.35□□□□□ -2.47
GGA1Q06336 YER137W-AYER137W-A 306 nt-0.35□□□□□ -2.47
GGA1Q06336 YKL063CYKL063C 504 nt-0.36□□□□□ -2.47
GGA1Q06336 RAD61YDR014W 1944 nt-0.36□□□□□ -2.47
GGA1Q06336 YJL007CYJL007C 315 nt-0.37□□□□□ -2.47
GGA1Q06336 YAL016C-BYAL016C-B 186 nt-0.37□□□□□ -2.47
GGA1Q06336 YMR158W-BYMR158W-B 321 nt-0.37□□□□□ -2.47
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms