Protein–RNA interactions for Protein: Q04431

KRE28, Spindle pole body component KRE28, yeastyeast

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
KRE28Q04431 YOL013W-AYOL013W-A 192 nt0.17□□□□□ -2.38
KRE28Q04431 YOL014WYOL014W 375 nt0.17□□□□□ -2.38
KRE28Q04431 SGF11YPL047W 300 nt0.17□□□□□ -2.38
KRE28Q04431 MLP1YKR095W 5628 nt0.16□□□□□ -2.38
KRE28Q04431 HMRA2YCR096C 360 nt0.16□□□□□ -2.38
KRE28Q04431 PCC1YKR095W-A 267 nt0.16□□□□□ -2.38
KRE28Q04431 YAL067W-AYAL067W-A 228 nt0.16□□□□□ -2.38
KRE28Q04431 TAR1YLR154W-C 375 nt0.16□□□□□ -2.38
KRE28Q04431 YPL068CYPL068C 882 nt0.16□□□□□ -2.38
KRE28Q04431 HAL9YOL089C 3093 nt0.16□□□□□ -2.38
KRE28Q04431 YLR334CYLR334C 381 nt0.15□□□□□ -2.39
KRE28Q04431 YDL185C-AYDL185C-A 228 nt0.14□□□□□ -2.39
KRE28Q04431 ATP19YOL077W-A 207 nt0.14□□□□□ -2.39
KRE28Q04431 YPL225WYPL225W 441 nt0.14□□□□□ -2.39
KRE28Q04431 YNL054W-BYNL054W-B 5250 nt0.14□□□□□ -2.39
KRE28Q04431 YOR345CYOR345C 351 nt0.13□□□□□ -2.39
KRE28Q04431 ORC3YLL004W 1851 nt0.12□□□□□ -2.39
KRE28Q04431 RPS25BYLR333C 327 nt0.11□□□□□ -2.39
KRE28Q04431 QCR9YGR183C 201 nt0.1□□□□□ -2.39
KRE28Q04431 YJL120WYJL120W 324 nt0.1□□□□□ -2.39
KRE28Q04431 YOR032W-AYOR032W-A 201 nt0.1□□□□□ -2.39
KRE28Q04431 snR190snR190 190 nt0.1□□□□□ -2.39
KRE28Q04431 ESP1YGR098C 4893 nt0.09□□□□□ -2.39
KRE28Q04431 YDR371C-AYDR371C-A 105 nt0.09□□□□□ -2.4
KRE28Q04431 YAL016C-BYAL016C-B 186 nt0.09□□□□□ -2.4
KRE28Q04431 snR189snR189 189 nt0.09□□□□□ -2.4
KRE28Q04431 tN(GUU)QtN(GUU)Q 71 nt0.08□□□□□ -2.4
KRE28Q04431 YLR434CYLR434C 384 nt0.08□□□□□ -2.4
KRE28Q04431 LEE1YPL054W 906 nt0.08□□□□□ -2.4
KRE28Q04431 RCO1YMR075W 2055 nt0.07□□□□□ -2.4
KRE28Q04431 YCR018C-AYCR018C-A 255 nt0.07□□□□□ -2.4
KRE28Q04431 RPS26AYGL189C 360 nt0.07□□□□□ -2.4
KRE28Q04431 YNL303WYNL303W 348 nt0.07□□□□□ -2.4
KRE28Q04431 YBL100W-BYBL100W-B 5313 nt0.07□□□□□ -2.4
KRE28Q04431 NNF2YGR089W 2811 nt0.05□□□□□ -2.4
KRE28Q04431 MYO1YHR023W 5787 nt0.04□□□□□ -2.4
KRE28Q04431 CSN9YDR179C 489 nt0.04□□□□□ -2.4
KRE28Q04431 COX12YLR038C 252 nt0.04□□□□□ -2.4
KRE28Q04431 VPS20YMR077C 666 nt0.04□□□□□ -2.4
KRE28Q04431 YMR307C-AYMR307C-A 195 nt0.03□□□□□ -2.4
KRE28Q04431 YNL146WYNL146W 303 nt0.03□□□□□ -2.4
KRE28Q04431 THO2YNL139C 4794 nt0.03□□□□□ -2.41
KRE28Q04431 MLP2YIL149C 5040 nt0.02□□□□□ -2.41
KRE28Q04431 YHR138CYHR138C 345 nt0.02□□□□□ -2.41
KRE28Q04431 YAR029WYAR029W 225 nt0.02□□□□□ -2.41
KRE28Q04431 YHR007C-AYHR007C-A 216 nt0.01□□□□□ -2.41
KRE28Q04431 NIP1YMR309C 2439 nt-0.02□□□□□ -2.41
KRE28Q04431 YER078W-AYER078W-A 165 nt-0.02□□□□□ -2.41
KRE28Q04431 YLR406C-AYLR406C-A 150 nt-0.02□□□□□ -2.41
KRE28Q04431 YPR092WYPR092W 306 nt-0.03□□□□□ -2.41
KRE28Q04431 YDR354C-AYDR354C-A 144 nt-0.05□□□□□ -2.42
KRE28Q04431 ULI1YFR026C 510 nt-0.05□□□□□ -2.42
KRE28Q04431 YOR186C-AYOR186C-A 210 nt-0.05□□□□□ -2.42
KRE28Q04431 YCR022CYCR022C 345 nt-0.06□□□□□ -2.42
KRE28Q04431 YLR282CYLR282C 342 nt-0.06□□□□□ -2.42
KRE28Q04431 COY1YKL179C 2040 nt-0.06□□□□□ -2.42
KRE28Q04431 YJL007CYJL007C 315 nt-0.07□□□□□ -2.42
KRE28Q04431 SSS1YDR086C 243 nt-0.08□□□□□ -2.42
KRE28Q04431 YKL136WYKL136W 399 nt-0.08□□□□□ -2.42
KRE28Q04431 PRM3YPL192C 402 nt-0.09□□□□□ -2.42
KRE28Q04431 YHR131W-AYHR131W-A 246 nt-0.1□□□□□ -2.43
KRE28Q04431 YJL026C-AYJL026C-A 222 nt-0.1□□□□□ -2.43
KRE28Q04431 YKU70YMR284W 1809 nt-0.1□□□□□ -2.43
KRE28Q04431 YKL063CYKL063C 504 nt-0.11□□□□□ -2.43
KRE28Q04431 BUL2YML111W 2763 nt-0.11□□□□□ -2.43
KRE28Q04431 COG8YML071C 1824 nt-0.12□□□□□ -2.43
KRE28Q04431 RPL35AYDL191W 363 nt-0.12□□□□□ -2.43
KRE28Q04431 YER137W-AYER137W-A 306 nt-0.12□□□□□ -2.43
KRE28Q04431 YLL006W-AYLL006W-A 177 nt-0.12□□□□□ -2.43
KRE28Q04431 HTB2YBL002W 396 nt-0.12□□□□□ -2.43
KRE28Q04431 YLR202CYLR202C 327 nt-0.14□□□□□ -2.43
KRE28Q04431 YOR161W-AYOR161W-A 81 nt-0.14□□□□□ -2.43
KRE28Q04431 YPL205CYPL205C 345 nt-0.14□□□□□ -2.43
KRE28Q04431 snR45snR45 172 nt-0.14□□□□□ -2.43
KRE28Q04431 SOV1YMR066W 2697 nt-0.15□□□□□ -2.43
KRE28Q04431 YBR285WYBR285W 435 nt-0.15□□□□□ -2.43
KRE28Q04431 YEL073CYEL073C 324 nt-0.16□□□□□ -2.44
KRE28Q04431 YER079WYER079W 633 nt-0.16□□□□□ -2.44
KRE28Q04431 YIL115W-AYIL115W-A 372 nt-0.16□□□□□ -2.44
KRE28Q04431 YLR232WYLR232W 348 nt-0.17□□□□□ -2.44
KRE28Q04431 YOR121CYOR121C 306 nt-0.17□□□□□ -2.44
KRE28Q04431 tW(UCA)QtW(UCA)Q 74 nt-0.18□□□□□ -2.44
KRE28Q04431 YAR053WYAR053W 297 nt-0.18□□□□□ -2.44
KRE28Q04431 RPS27BYHR021C 249 nt-0.19□□□□□ -2.44
KRE28Q04431 YEL020C-BYEL020C-B 198 nt-0.21□□□□□ -2.44
KRE28Q04431 YGL123C-AYGL123C-A 231 nt-0.21□□□□□ -2.44
KRE28Q04431 YMR001C-AYMR001C-A 231 nt-0.21□□□□□ -2.44
KRE28Q04431 SNU13YEL026W 381 nt-0.22□□□□□ -2.44
KRE28Q04431 YLR041WYLR041W 321 nt-0.22□□□□□ -2.44
KRE28Q04431 YDR048CYDR048C 315 nt-0.23□□□□□ -2.45
KRE28Q04431 AGA2YGL032C 264 nt-0.23□□□□□ -2.45
KRE28Q04431 BLI1YKL061W 342 nt-0.23□□□□□ -2.45
KRE28Q04431 CSE2YNR010W 450 nt-0.24□□□□□ -2.45
KRE28Q04431 YDR366CYDR366C 399 nt-0.28□□□□□ -2.45
KRE28Q04431 YFL063WYFL063W 456 nt-0.28□□□□□ -2.45
KRE28Q04431 snR8snR8 190 nt-0.29□□□□□ -2.46
KRE28Q04431 YJR157WYJR157W 363 nt-0.29□□□□□ -2.46
KRE28Q04431 YNL324WYNL324W 396 nt-0.29□□□□□ -2.46
KRE28Q04431 snR128snR128 126 nt-0.29□□□□□ -2.46
KRE28Q04431 YBR072C-AYBR072C-A 162 nt-0.29□□□□□ -2.46
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms