Protein–RNA interactions for Protein: P54787

VPS9, Vacuolar protein sorting-associated protein 9, yeastyeast

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS9P54787 TAR1YLR154W-C 375 nt0.71□□□□□ -2.3
VPS9P54787 UTP10YJL109C 5310 nt0.71□□□□□ -2.3
VPS9P54787 INA22YIR024C 651 nt0.7□□□□□ -2.3
VPS9P54787 BIL1YOR304C-A 231 nt0.7□□□□□ -2.3
VPS9P54787 SGF11YPL047W 300 nt0.7□□□□□ -2.3
VPS9P54787 PAA1YDR071C 576 nt0.69□□□□□ -2.3
VPS9P54787 YMR272W-AYMR272W-A 114 nt0.69□□□□□ -2.3
VPS9P54787 SSS1YDR086C 243 nt0.68□□□□□ -2.3
VPS9P54787 YML002WYML002W 2214 nt0.68□□□□□ -2.3
VPS9P54787 YMR160WYMR160W 2451 nt0.67□□□□□ -2.3
VPS9P54787 YMR031W-AYMR031W-A 327 nt0.67□□□□□ -2.3
VPS9P54787 RPL26BYGR034W 384 nt0.66□□□□□ -2.3
VPS9P54787 YHR007C-AYHR007C-A 216 nt0.66□□□□□ -2.3
VPS9P54787 YDR048CYDR048C 315 nt0.65□□□□□ -2.31
VPS9P54787 YAL063C-AYAL063C-A 291 nt0.64□□□□□ -2.31
VPS9P54787 UTP20YBL004W 7482 nt0.64□□□□□ -2.31
VPS9P54787 FYV10YIL097W 1551 nt0.63□□□□□ -2.31
VPS9P54787 YIL115W-AYIL115W-A 372 nt0.63□□□□□ -2.31
VPS9P54787 YOR218CYOR218C 420 nt0.63□□□□□ -2.31
VPS9P54787 YDL185C-AYDL185C-A 228 nt0.62□□□□□ -2.31
VPS9P54787 YDR118W-AYDR118W-A 117 nt0.62□□□□□ -2.31
VPS9P54787 YHL046W-AYHL046W-A 327 nt0.61□□□□□ -2.31
VPS9P54787 YIL134C-AYIL134C-A 204 nt0.61□□□□□ -2.31
VPS9P54787 YPR016W-AYPR016W-A 261 nt0.6□□□□□ -2.31
VPS9P54787 YPR160W-AYPR160W-A 81 nt0.6□□□□□ -2.31
VPS9P54787 COG8YML071C 1824 nt0.59□□□□□ -2.31
VPS9P54787 YMR321CYMR321C 318 nt0.58□□□□□ -2.32
VPS9P54787 YJL127W-AYJL127W-A 117 nt0.57□□□□□ -2.32
VPS9P54787 PRP5YBR237W 2550 nt0.57□□□□□ -2.32
VPS9P54787 SEC8YPR055W 3198 nt0.57□□□□□ -2.32
VPS9P54787 tF(GAA)BtF(GAA)B 73 nt0.56□□□□□ -2.32
VPS9P54787 tF(GAA)FtF(GAA)F 73 nt0.56□□□□□ -2.32
VPS9P54787 tF(GAA)GtF(GAA)G 73 nt0.56□□□□□ -2.32
VPS9P54787 tF(GAA)H1tF(GAA)H1 73 nt0.56□□□□□ -2.32
VPS9P54787 tF(GAA)H2tF(GAA)H2 73 nt0.56□□□□□ -2.32
VPS9P54787 tF(GAA)MtF(GAA)M 73 nt0.56□□□□□ -2.32
VPS9P54787 tF(GAA)P1tF(GAA)P1 73 nt0.56□□□□□ -2.32
VPS9P54787 tF(GAA)P2tF(GAA)P2 73 nt0.56□□□□□ -2.32
VPS9P54787 YFL019CYFL019C 354 nt0.55□□□□□ -2.32
VPS9P54787 YDR354C-AYDR354C-A 144 nt0.54□□□□□ -2.32
VPS9P54787 COX5BYIL111W 456 nt0.53□□□□□ -2.32
VPS9P54787 YAL067W-AYAL067W-A 228 nt0.53□□□□□ -2.32
VPS9P54787 YLR399W-AYLR399W-A 105 nt0.53□□□□□ -2.32
VPS9P54787 YAF9YNL107W 681 nt0.53□□□□□ -2.32
VPS9P54787 snR190snR190 190 nt0.53□□□□□ -2.32
VPS9P54787 YCR018C-AYCR018C-A 255 nt0.52□□□□□ -2.33
VPS9P54787 OST4YDL232W 111 nt0.52□□□□□ -2.33
VPS9P54787 RPS27BYHR021C 249 nt0.51□□□□□ -2.33
VPS9P54787 ULP2YIL031W 3105 nt0.51□□□□□ -2.33
VPS9P54787 SBH1YER087C-B 249 nt0.5□□□□□ -2.33
VPS9P54787 PRP42YDR235W 1635 nt0.49□□□□□ -2.33
VPS9P54787 PET111YMR257C 2403 nt0.49□□□□□ -2.33
VPS9P54787 HAL9YOL089C 3093 nt0.49□□□□□ -2.33
VPS9P54787 PAU12YGR294W 363 nt0.49□□□□□ -2.33
VPS9P54787 YJL026C-AYJL026C-A 222 nt0.49□□□□□ -2.33
VPS9P54787 YOR192C-BYOR192C-B 5313 nt0.49□□□□□ -2.33
VPS9P54787 YSP1YHR155W 3687 nt0.48□□□□□ -2.33
VPS9P54787 YDR102CYDR102C 333 nt0.48□□□□□ -2.33
VPS9P54787 YMR307C-AYMR307C-A 195 nt0.48□□□□□ -2.33
VPS9P54787 YOR345CYOR345C 351 nt0.48□□□□□ -2.33
VPS9P54787 YPR170W-AYPR170W-A 186 nt0.48□□□□□ -2.33
VPS9P54787 FMP27YLR454W 7887 nt0.48□□□□□ -2.33
VPS9P54787 VIK1YPL253C 1944 nt0.47□□□□□ -2.33
VPS9P54787 snR60snR60 104 nt0.47□□□□□ -2.33
VPS9P54787 tN(GUU)QtN(GUU)Q 71 nt0.46□□□□□ -2.34
VPS9P54787 YKL145W-AYKL145W-A 93 nt0.46□□□□□ -2.34
VPS9P54787 YPR012WYPR012W 255 nt0.46□□□□□ -2.34
VPS9P54787 HTL1YCR020W-B 237 nt0.44□□□□□ -2.34
VPS9P54787 CSE2YNR010W 450 nt0.44□□□□□ -2.34
VPS9P54787 QCR9YGR183C 201 nt0.42□□□□□ -2.34
VPS9P54787 YIL032CYIL032C 357 nt0.42□□□□□ -2.34
VPS9P54787 YKL136WYKL136W 399 nt0.42□□□□□ -2.34
VPS9P54787 YLR282CYLR282C 342 nt0.42□□□□□ -2.34
VPS9P54787 ABF2YMR072W 552 nt0.42□□□□□ -2.34
VPS9P54787 YPR092WYPR092W 306 nt0.42□□□□□ -2.34
VPS9P54787 BEM3YPL115C 3387 nt0.42□□□□□ -2.34
VPS9P54787 YPR197CYPR197C 564 nt0.41□□□□□ -2.34
VPS9P54787 COY1YKL179C 2040 nt0.4□□□□□ -2.34
VPS9P54787 ULI1YFR026C 510 nt0.4□□□□□ -2.35
VPS9P54787 YOR161W-AYOR161W-A 81 nt0.38□□□□□ -2.35
VPS9P54787 YPL038W-AYPL038W-A 192 nt0.38□□□□□ -2.35
VPS9P54787 YCR022CYCR022C 345 nt0.37□□□□□ -2.35
VPS9P54787 YEL020C-BYEL020C-B 198 nt0.37□□□□□ -2.35
VPS9P54787 YOL014WYOL014W 375 nt0.37□□□□□ -2.35
VPS9P54787 AI1Q0050 2505 nt0.37□□□□□ -2.35
VPS9P54787 snR36snR36 182 nt0.36□□□□□ -2.35
VPS9P54787 TRS65YGR166W 1683 nt0.36□□□□□ -2.35
VPS9P54787 YDR183C-AYDR183C-A 258 nt0.35□□□□□ -2.35
VPS9P54787 YJL197C-AYJL197C-A 282 nt0.35□□□□□ -2.35
VPS9P54787 YMR193C-AYMR193C-A 387 nt0.35□□□□□ -2.35
VPS9P54787 MYO1YHR023W 5787 nt0.34□□□□□ -2.36
VPS9P54787 NNF2YGR089W 2811 nt0.33□□□□□ -2.36
VPS9P54787 ORC3YLL004W 1851 nt0.33□□□□□ -2.36
VPS9P54787 YLL019W-AYLL019W-A 93 nt0.33□□□□□ -2.36
VPS9P54787 YDR371C-AYDR371C-A 105 nt0.32□□□□□ -2.36
VPS9P54787 RPS26AYGL189C 360 nt0.32□□□□□ -2.36
VPS9P54787 IQG1YPL242C 4488 nt0.32□□□□□ -2.36
VPS9P54787 MLP1YKR095W 5628 nt0.31□□□□□ -2.36
VPS9P54787 YFL063WYFL063W 456 nt0.31□□□□□ -2.36
VPS9P54787 YGL123C-AYGL123C-A 231 nt0.31□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 64.3 ms