Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CLTCL1P53675 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC28.89■■■□□ 2.22
CLTCL1P53675 CALM3-202ENST00000391918 702 ntTSL 2 BASIC28.89■■■□□ 2.22
CLTCL1P53675 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
CLTCL1P53675 AL390955.1-201ENST00000428694 934 ntBASIC28.89■■■□□ 2.22
CLTCL1P53675 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC28.89■■■□□ 2.22
CLTCL1P53675 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC28.89■■■□□ 2.22
CLTCL1P53675 WWC2-AS2-201ENST00000578387 2183 ntBASIC28.89■■■□□ 2.22
CLTCL1P53675 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CLTCL1P53675 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
CLTCL1P53675 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CLTCL1P53675 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
CLTCL1P53675 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
CLTCL1P53675 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC28.88■■■□□ 2.21
CLTCL1P53675 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC28.88■■■□□ 2.21
CLTCL1P53675 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
CLTCL1P53675 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CLTCL1P53675 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
CLTCL1P53675 KRT16P1-201ENST00000399124 1418 ntBASIC28.87■■■□□ 2.21
CLTCL1P53675 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
CLTCL1P53675 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC28.87■■■□□ 2.21
CLTCL1P53675 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC28.87■■■□□ 2.21
CLTCL1P53675 AC004264.1-201ENST00000608354 794 ntBASIC28.87■■■□□ 2.21
CLTCL1P53675 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC28.87■■■□□ 2.21
CLTCL1P53675 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
CLTCL1P53675 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
CLTCL1P53675 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CLTCL1P53675 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
CLTCL1P53675 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CLTCL1P53675 HLA-G-202ENST00000376815 851 ntBASIC28.87■■■□□ 2.21
CLTCL1P53675 HLA-G-203ENST00000376818 1127 ntBASIC28.87■■■□□ 2.21
CLTCL1P53675 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CLTCL1P53675 AL355355.2-201ENST00000442321 338 ntBASIC28.87■■■□□ 2.21
CLTCL1P53675 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
CLTCL1P53675 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC28.87■■■□□ 2.21
CLTCL1P53675 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC28.86■■■□□ 2.21
CLTCL1P53675 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CLTCL1P53675 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CLTCL1P53675 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
CLTCL1P53675 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
CLTCL1P53675 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CLTCL1P53675 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
CLTCL1P53675 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CLTCL1P53675 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC28.86■■■□□ 2.21
CLTCL1P53675 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CLTCL1P53675 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CLTCL1P53675 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CLTCL1P53675 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
CLTCL1P53675 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
CLTCL1P53675 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
CLTCL1P53675 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC28.85■■■□□ 2.21
CLTCL1P53675 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC28.85■■■□□ 2.21
CLTCL1P53675 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC28.85■■■□□ 2.21
CLTCL1P53675 DPP3P2-201ENST00000416030 1696 ntBASIC28.85■■■□□ 2.21
CLTCL1P53675 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC28.85■■■□□ 2.21
CLTCL1P53675 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CLTCL1P53675 AP002982.1-201ENST00000492365 877 ntBASIC28.84■■■□□ 2.21
CLTCL1P53675 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC28.84■■■□□ 2.21
CLTCL1P53675 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC28.84■■■□□ 2.21
CLTCL1P53675 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC28.84■■■□□ 2.21
CLTCL1P53675 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
CLTCL1P53675 AC006128.1-201ENST00000624704 1661 ntBASIC28.84■■■□□ 2.21
CLTCL1P53675 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC28.84■■■□□ 2.21
CLTCL1P53675 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
CLTCL1P53675 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC28.84■■■□□ 2.21
CLTCL1P53675 KRT8P17-201ENST00000453110 1448 ntBASIC28.84■■■□□ 2.21
CLTCL1P53675 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CLTCL1P53675 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC28.84■■■□□ 2.21
CLTCL1P53675 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC28.84■■■□□ 2.21
CLTCL1P53675 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
CLTCL1P53675 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC28.83■■■□□ 2.21
CLTCL1P53675 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC28.83■■■□□ 2.21
CLTCL1P53675 AC116562.2-201ENST00000507042 360 ntBASIC28.83■■■□□ 2.21
CLTCL1P53675 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC28.83■■■□□ 2.21
CLTCL1P53675 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
CLTCL1P53675 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CLTCL1P53675 BID-203ENST00000399765 1879 ntTSL 2 BASIC28.83■■■□□ 2.21
CLTCL1P53675 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC28.83■■■□□ 2.21
CLTCL1P53675 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
CLTCL1P53675 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC28.83■■■□□ 2.21
CLTCL1P53675 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CLTCL1P53675 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CLTCL1P53675 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CLTCL1P53675 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CLTCL1P53675 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
CLTCL1P53675 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC28.82■■■□□ 2.2
CLTCL1P53675 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC28.82■■■□□ 2.2
CLTCL1P53675 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
CLTCL1P53675 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CLTCL1P53675 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CLTCL1P53675 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC28.82■■■□□ 2.2
CLTCL1P53675 P4HB-223ENST00000576390 439 ntTSL 4 BASIC28.82■■■□□ 2.2
CLTCL1P53675 AC145285.6-201ENST00000604632 637 ntBASIC28.82■■■□□ 2.2
CLTCL1P53675 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
CLTCL1P53675 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
CLTCL1P53675 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC28.82■■■□□ 2.2
CLTCL1P53675 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
CLTCL1P53675 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CLTCL1P53675 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
CLTCL1P53675 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms