Protein–RNA interactions for Protein: P47093

LSM8, U6 snRNA-associated Sm-like protein LSm8, yeastyeast

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM8P47093 RAD61YDR014W 1944 nt-0.56□□□□□ -2.5
LSM8P47093 ECL1YGR146C 636 nt-0.57□□□□□ -2.5
LSM8P47093 YLR101CYLR101C 396 nt-0.57□□□□□ -2.5
LSM8P47093 HTB2YBL002W 396 nt-0.57□□□□□ -2.5
LSM8P47093 YPR002C-AYPR002C-A 198 nt-0.57□□□□□ -2.5
LSM8P47093 SEC10YLR166C 2616 nt-0.58□□□□□ -2.5
LSM8P47093 HMRA2YCR096C 360 nt-0.59□□□□□ -2.5
LSM8P47093 YGR164WYGR164W 336 nt-0.59□□□□□ -2.5
LSM8P47093 YOL014WYOL014W 375 nt-0.59□□□□□ -2.5
LSM8P47093 ZEO1YOL109W 342 nt-0.59□□□□□ -2.5
LSM8P47093 PRP39YML046W 1890 nt-0.59□□□□□ -2.5
LSM8P47093 YKL083WYKL083W 615 nt-0.6□□□□□ -2.51
LSM8P47093 FYV7YLR068W 456 nt-0.6□□□□□ -2.51
LSM8P47093 YJL007CYJL007C 315 nt-0.61□□□□□ -2.51
LSM8P47093 DIE2YGR227W 1578 nt-0.62□□□□□ -2.51
LSM8P47093 YLR334CYLR334C 381 nt-0.62□□□□□ -2.51
LSM8P47093 YML007C-AYML007C-A 111 nt-0.62□□□□□ -2.51
LSM8P47093 tF(GAA)BtF(GAA)B 73 nt-0.63□□□□□ -2.51
LSM8P47093 tF(GAA)FtF(GAA)F 73 nt-0.63□□□□□ -2.51
LSM8P47093 tF(GAA)GtF(GAA)G 73 nt-0.63□□□□□ -2.51
LSM8P47093 tF(GAA)H1tF(GAA)H1 73 nt-0.63□□□□□ -2.51
LSM8P47093 tF(GAA)H2tF(GAA)H2 73 nt-0.63□□□□□ -2.51
LSM8P47093 tF(GAA)MtF(GAA)M 73 nt-0.63□□□□□ -2.51
LSM8P47093 tF(GAA)P1tF(GAA)P1 73 nt-0.63□□□□□ -2.51
LSM8P47093 tF(GAA)P2tF(GAA)P2 73 nt-0.63□□□□□ -2.51
LSM8P47093 YLR287CYLR287C 1068 nt-0.63□□□□□ -2.51
LSM8P47093 YDR426CYDR426C 378 nt-0.64□□□□□ -2.51
LSM8P47093 YIR030W-AYIR030W-A 384 nt-0.64□□□□□ -2.51
LSM8P47093 YJL047C-AYJL047C-A 135 nt-0.64□□□□□ -2.51
LSM8P47093 YLR282CYLR282C 342 nt-0.64□□□□□ -2.51
LSM8P47093 GPI15YNL038W 690 nt-0.64□□□□□ -2.51
LSM8P47093 YOR192C-CYOR192C-C 237 nt-0.64□□□□□ -2.51
LSM8P47093 YJL120WYJL120W 324 nt-0.65□□□□□ -2.51
LSM8P47093 RPS25BYLR333C 327 nt-0.65□□□□□ -2.51
LSM8P47093 PCF11YDR228C 1881 nt-0.65□□□□□ -2.51
LSM8P47093 URB1YKL014C 5295 nt-0.66□□□□□ -2.52
LSM8P47093 YPL068CYPL068C 882 nt-0.68□□□□□ -2.52
LSM8P47093 YPL205CYPL205C 345 nt-0.69□□□□□ -2.52
LSM8P47093 YLR285C-AYLR285C-A 171 nt-0.7□□□□□ -2.52
LSM8P47093 YNL303WYNL303W 348 nt-0.7□□□□□ -2.52
LSM8P47093 snR46snR46 197 nt-0.7□□□□□ -2.52
LSM8P47093 ISF1YMR081C 1017 nt-0.71□□□□□ -2.52
LSM8P47093 YGR174W-AYGR174W-A 87 nt-0.72□□□□□ -2.52
LSM8P47093 YBR099CYBR099C 384 nt-0.72□□□□□ -2.52
LSM8P47093 YHR138CYHR138C 345 nt-0.73□□□□□ -2.53
LSM8P47093 Q0255Q0255 1419 nt-0.73□□□□□ -2.53
LSM8P47093 YDR354C-AYDR354C-A 144 nt-0.74□□□□□ -2.53
LSM8P47093 SNU13YEL026W 381 nt-0.74□□□□□ -2.53
LSM8P47093 YER084W-AYER084W-A 513 nt-0.74□□□□□ -2.53
LSM8P47093 YHR125WYHR125W 306 nt-0.74□□□□□ -2.53
LSM8P47093 YOR161W-AYOR161W-A 81 nt-0.74□□□□□ -2.53
LSM8P47093 YAR047CYAR047C 321 nt-0.75□□□□□ -2.53
LSM8P47093 YDL032WYDL032W 312 nt-0.76□□□□□ -2.53
LSM8P47093 YHR007C-AYHR007C-A 216 nt-0.76□□□□□ -2.53
LSM8P47093 BLI1YKL061W 342 nt-0.76□□□□□ -2.53
LSM8P47093 PCC1YKR095W-A 267 nt-0.76□□□□□ -2.53
LSM8P47093 YLR456WYLR456W 615 nt-0.76□□□□□ -2.53
LSM8P47093 YBR072C-AYBR072C-A 162 nt-0.76□□□□□ -2.53
LSM8P47093 EST1YLR233C 2100 nt-0.76□□□□□ -2.53
LSM8P47093 CBS1YDL069C 690 nt-0.77□□□□□ -2.53
LSM8P47093 YJL026C-AYJL026C-A 222 nt-0.77□□□□□ -2.53
LSM8P47093 AIM29YKR074W 468 nt-0.78□□□□□ -2.53
LSM8P47093 YLR041WYLR041W 321 nt-0.78□□□□□ -2.53
LSM8P47093 YMR158W-BYMR158W-B 321 nt-0.78□□□□□ -2.53
LSM8P47093 YPR170W-AYPR170W-A 186 nt-0.79□□□□□ -2.54
LSM8P47093 YDR366CYDR366C 399 nt-0.84□□□□□ -2.54
LSM8P47093 CSE1YGL238W 2883 nt-0.84□□□□□ -2.54
LSM8P47093 YGL123C-AYGL123C-A 231 nt-0.85□□□□□ -2.55
LSM8P47093 EAF6YJR082C 342 nt-0.86□□□□□ -2.55
LSM8P47093 UTP8YGR128C 2142 nt-0.86□□□□□ -2.55
LSM8P47093 YNL067W-BYNL067W-B 141 nt-0.87□□□□□ -2.55
LSM8P47093 YFL012WYFL012W 447 nt-0.88□□□□□ -2.55
LSM8P47093 YDL007C-AYDL007C-A 258 nt-0.89□□□□□ -2.55
LSM8P47093 YEL020C-BYEL020C-B 198 nt-0.9□□□□□ -2.55
LSM8P47093 STF2YGR008C 255 nt-0.92□□□□□ -2.56
LSM8P47093 YIL071W-AYIL071W-A 477 nt-0.92□□□□□ -2.56
LSM8P47093 YAR029WYAR029W 225 nt-0.92□□□□□ -2.56
LSM8P47093 PRM3YPL192C 402 nt-0.93□□□□□ -2.56
LSM8P47093 snR54snR54 86 nt-0.93□□□□□ -2.56
LSM8P47093 GLG1YKR058W 1851 nt-0.93□□□□□ -2.56
LSM8P47093 AGA2YGL032C 264 nt-0.94□□□□□ -2.56
LSM8P47093 YHR130CYHR130C 336 nt-0.94□□□□□ -2.56
LSM8P47093 YKL100W-AYKL100W-A 90 nt-0.94□□□□□ -2.56
LSM8P47093 snR33snR33 183 nt-0.94□□□□□ -2.56
LSM8P47093 BI2Q0110 1272 nt-0.95□□□□□ -2.56
LSM8P47093 YKL123WYKL123W 381 nt-0.95□□□□□ -2.56
LSM8P47093 YLR264C-AYLR264C-A 117 nt-0.97□□□□□ -2.56
LSM8P47093 RPM2YML091C 3609 nt-0.97□□□□□ -2.57
LSM8P47093 CSN9YDR179C 489 nt-0.98□□□□□ -2.57
LSM8P47093 SDH6YDR379C-A 240 nt-0.98□□□□□ -2.57
LSM8P47093 YFL063WYFL063W 456 nt-0.98□□□□□ -2.57
LSM8P47093 VPS20YMR077C 666 nt-0.98□□□□□ -2.57
LSM8P47093 tT(UGU)G1tT(UGU)G1 72 nt-0.99□□□□□ -2.57
LSM8P47093 tT(UGU)G2tT(UGU)G2 72 nt-0.99□□□□□ -2.57
LSM8P47093 tT(UGU)PtT(UGU)P 72 nt-0.99□□□□□ -2.57
LSM8P47093 tA(UGC)QtA(UGC)Q 76 nt-1□□□□□ -2.57
LSM8P47093 STE18YJR086W 333 nt-1.01□□□□□ -2.57
LSM8P47093 QCR9YGR183C 201 nt-1.02□□□□□ -2.57
LSM8P47093 HUG1YML058W-A 207 nt-1.03□□□□□ -2.57
LSM8P47093 YER006C-AYER006C-A 318 nt-1.04□□□□□ -2.58
Retrieved 100 of 7,029 protein–RNA pairs in 180.9 ms