Protein–RNA interactions for Protein: P39000

SHC1, Protein SHC1, yeastyeast

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHC1P39000 PTP2YOR208W 2253 nt0.54□□□□□ -2.32
SHC1P39000 CSN9YDR179C 489 nt0.53□□□□□ -2.32
SHC1P39000 YER137W-AYER137W-A 306 nt0.52□□□□□ -2.33
SHC1P39000 YOR293C-AYOR293C-A 150 nt0.52□□□□□ -2.33
SHC1P39000 YPL044CYPL044C 549 nt0.52□□□□□ -2.33
SHC1P39000 LEE1YPL054W 906 nt0.52□□□□□ -2.33
SHC1P39000 YFR012W-AYFR012W-A 87 nt0.51□□□□□ -2.33
SHC1P39000 BSC3YLR465C 309 nt0.51□□□□□ -2.33
SHC1P39000 YBR285WYBR285W 435 nt0.51□□□□□ -2.33
SHC1P39000 YHR138CYHR138C 345 nt0.5□□□□□ -2.33
SHC1P39000 AGA2YGL032C 264 nt0.49□□□□□ -2.33
SHC1P39000 tW(UCA)QtW(UCA)Q 74 nt0.49□□□□□ -2.33
SHC1P39000 YKL063CYKL063C 504 nt0.48□□□□□ -2.33
SHC1P39000 YLR264C-AYLR264C-A 117 nt0.48□□□□□ -2.33
SHC1P39000 YLR334CYLR334C 381 nt0.48□□□□□ -2.33
SHC1P39000 YLR222C-AYLR222C-A 231 nt0.47□□□□□ -2.33
SHC1P39000 FYV10YIL097W 1551 nt0.46□□□□□ -2.34
SHC1P39000 PCC1YKR095W-A 267 nt0.46□□□□□ -2.34
SHC1P39000 YNL211CYNL211C 261 nt0.46□□□□□ -2.34
SHC1P39000 YOR011W-AYOR011W-A 207 nt0.46□□□□□ -2.34
SHC1P39000 RPL26BYGR034W 384 nt0.45□□□□□ -2.34
SHC1P39000 YNL324WYNL324W 396 nt0.45□□□□□ -2.34
SHC1P39000 YOR053WYOR053W 342 nt0.45□□□□□ -2.34
SHC1P39000 YSP1YHR155W 3687 nt0.44□□□□□ -2.34
SHC1P39000 YIL134C-AYIL134C-A 204 nt0.44□□□□□ -2.34
SHC1P39000 VAR1Q0140 1197 nt0.43□□□□□ -2.34
SHC1P39000 YOR121CYOR121C 306 nt0.43□□□□□ -2.34
SHC1P39000 SPO21YOL091W 1830 nt0.43□□□□□ -2.34
SHC1P39000 RPL35AYDL191W 363 nt0.42□□□□□ -2.34
SHC1P39000 PAA1YDR071C 576 nt0.42□□□□□ -2.34
SHC1P39000 YJL120WYJL120W 324 nt0.42□□□□□ -2.34
SHC1P39000 YAR029WYAR029W 225 nt0.42□□□□□ -2.34
SHC1P39000 TAR1YLR154W-C 375 nt0.42□□□□□ -2.34
SHC1P39000 YMR001C-AYMR001C-A 231 nt0.42□□□□□ -2.34
SHC1P39000 HMRA2YCR096C 360 nt0.41□□□□□ -2.34
SHC1P39000 YAR053WYAR053W 297 nt0.41□□□□□ -2.34
SHC1P39000 YPL225WYPL225W 441 nt0.41□□□□□ -2.34
SHC1P39000 SSS1YDR086C 243 nt0.4□□□□□ -2.35
SHC1P39000 YJL127W-AYJL127W-A 117 nt0.4□□□□□ -2.35
SHC1P39000 YAL068W-AYAL068W-A 255 nt0.4□□□□□ -2.35
SHC1P39000 RPS25BYLR333C 327 nt0.4□□□□□ -2.35
SHC1P39000 SGF11YPL047W 300 nt0.4□□□□□ -2.35
SHC1P39000 YLR154W-FYLR154W-F 141 nt0.39□□□□□ -2.35
SHC1P39000 YPR160W-AYPR160W-A 81 nt0.39□□□□□ -2.35
SHC1P39000 PRP5YBR237W 2550 nt0.39□□□□□ -2.35
SHC1P39000 YDL185C-AYDL185C-A 228 nt0.37□□□□□ -2.35
SHC1P39000 YHL046W-AYHL046W-A 327 nt0.37□□□□□ -2.35
SHC1P39000 YDR048CYDR048C 315 nt0.36□□□□□ -2.35
SHC1P39000 YDR118W-AYDR118W-A 117 nt0.36□□□□□ -2.35
SHC1P39000 SBH1YER087C-B 249 nt0.36□□□□□ -2.35
SHC1P39000 COX5BYIL111W 456 nt0.36□□□□□ -2.35
SHC1P39000 YIL115W-AYIL115W-A 372 nt0.36□□□□□ -2.35
SHC1P39000 HTB2YBL002W 396 nt0.36□□□□□ -2.35
SHC1P39000 YPR016W-AYPR016W-A 261 nt0.36□□□□□ -2.35
SHC1P39000 OST4YDL232W 111 nt0.35□□□□□ -2.35
SHC1P39000 YJL026C-AYJL026C-A 222 nt0.35□□□□□ -2.35
SHC1P39000 ABF2YMR072W 552 nt0.35□□□□□ -2.35
SHC1P39000 SEC8YPR055W 3198 nt0.35□□□□□ -2.35
SHC1P39000 HAL9YOL089C 3093 nt0.35□□□□□ -2.35
SHC1P39000 PET111YMR257C 2403 nt0.34□□□□□ -2.35
SHC1P39000 YDR157WYDR157W 402 nt0.34□□□□□ -2.36
SHC1P39000 YHR007C-AYHR007C-A 216 nt0.34□□□□□ -2.36
SHC1P39000 YGR035CYGR035C 351 nt0.33□□□□□ -2.36
SHC1P39000 YAL067W-AYAL067W-A 228 nt0.33□□□□□ -2.36
SHC1P39000 BEM3YPL115C 3387 nt0.32□□□□□ -2.36
SHC1P39000 YDR354C-AYDR354C-A 144 nt0.32□□□□□ -2.36
SHC1P39000 PRP42YDR235W 1635 nt0.31□□□□□ -2.36
SHC1P39000 YNL054W-BYNL054W-B 5250 nt0.31□□□□□ -2.36
SHC1P39000 YAF9YNL107W 681 nt0.31□□□□□ -2.36
SHC1P39000 BIL1YOR304C-A 231 nt0.31□□□□□ -2.36
SHC1P39000 YOR345CYOR345C 351 nt0.31□□□□□ -2.36
SHC1P39000 snR190snR190 190 nt0.31□□□□□ -2.36
SHC1P39000 YLR399W-AYLR399W-A 105 nt0.3□□□□□ -2.36
SHC1P39000 VIK1YPL253C 1944 nt0.29□□□□□ -2.36
SHC1P39000 tN(GUU)QtN(GUU)Q 71 nt0.29□□□□□ -2.36
SHC1P39000 MLP1YKR095W 5628 nt0.29□□□□□ -2.36
SHC1P39000 snR60snR60 104 nt0.27□□□□□ -2.37
SHC1P39000 YPR092WYPR092W 306 nt0.27□□□□□ -2.37
SHC1P39000 YCR018C-AYCR018C-A 255 nt0.26□□□□□ -2.37
SHC1P39000 YDR102CYDR102C 333 nt0.26□□□□□ -2.37
SHC1P39000 MLP2YIL149C 5040 nt0.26□□□□□ -2.37
SHC1P39000 YFL019CYFL019C 354 nt0.25□□□□□ -2.37
SHC1P39000 YMR307C-AYMR307C-A 195 nt0.25□□□□□ -2.37
SHC1P39000 YOR161W-AYOR161W-A 81 nt0.25□□□□□ -2.37
SHC1P39000 ESP1YGR098C 4893 nt0.25□□□□□ -2.37
SHC1P39000 COY1YKL179C 2040 nt0.25□□□□□ -2.37
SHC1P39000 ULI1YFR026C 510 nt0.24□□□□□ -2.37
SHC1P39000 RPS27BYHR021C 249 nt0.24□□□□□ -2.37
SHC1P39000 ORC3YLL004W 1851 nt0.24□□□□□ -2.37
SHC1P39000 CSE1YGL238W 2883 nt0.24□□□□□ -2.37
SHC1P39000 YDR371C-AYDR371C-A 105 nt0.23□□□□□ -2.37
SHC1P39000 YOR015WYOR015W 360 nt0.23□□□□□ -2.37
SHC1P39000 YIL032CYIL032C 357 nt0.22□□□□□ -2.37
SHC1P39000 YPR170W-AYPR170W-A 186 nt0.22□□□□□ -2.37
SHC1P39000 snR45snR45 172 nt0.22□□□□□ -2.37
SHC1P39000 YAL063C-AYAL063C-A 291 nt0.21□□□□□ -2.38
SHC1P39000 YLL019W-AYLL019W-A 93 nt0.21□□□□□ -2.38
SHC1P39000 YLR282CYLR282C 342 nt0.21□□□□□ -2.38
SHC1P39000 snR36snR36 182 nt0.21□□□□□ -2.38
SHC1P39000 RPS26AYGL189C 360 nt0.2□□□□□ -2.38
Retrieved 100 of 7,029 protein–RNA pairs in 8.9 ms