Protein–RNA interactions for Protein: P38971

ALP1, Basic amino-acid permease, yeastyeast

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ALP1P38971 YHR007C-AYHR007C-A 216 nt0.61□□□□□ -2.31
ALP1P38971 YMR031W-AYMR031W-A 327 nt0.61□□□□□ -2.31
ALP1P38971 YNL211CYNL211C 261 nt0.61□□□□□ -2.31
ALP1P38971 YMR321CYMR321C 318 nt0.6□□□□□ -2.31
ALP1P38971 TAR1YLR154W-C 375 nt0.59□□□□□ -2.31
ALP1P38971 YHL046W-AYHL046W-A 327 nt0.58□□□□□ -2.32
ALP1P38971 SEC8YPR055W 3198 nt0.58□□□□□ -2.32
ALP1P38971 FYV10YIL097W 1551 nt0.57□□□□□ -2.32
ALP1P38971 YML002WYML002W 2214 nt0.56□□□□□ -2.32
ALP1P38971 UTP10YJL109C 5310 nt0.56□□□□□ -2.32
ALP1P38971 YFR012W-AYFR012W-A 87 nt0.56□□□□□ -2.32
ALP1P38971 SGF11YPL047W 300 nt0.56□□□□□ -2.32
ALP1P38971 BEM3YPL115C 3387 nt0.56□□□□□ -2.32
ALP1P38971 HAL9YOL089C 3093 nt0.55□□□□□ -2.32
ALP1P38971 YDR048CYDR048C 315 nt0.55□□□□□ -2.32
ALP1P38971 YFL019CYFL019C 354 nt0.55□□□□□ -2.32
ALP1P38971 YLR399W-AYLR399W-A 105 nt0.55□□□□□ -2.32
ALP1P38971 YPR160W-AYPR160W-A 81 nt0.55□□□□□ -2.32
ALP1P38971 SSS1YDR086C 243 nt0.54□□□□□ -2.32
ALP1P38971 YDR118W-AYDR118W-A 117 nt0.54□□□□□ -2.32
ALP1P38971 UTP20YBL004W 7482 nt0.53□□□□□ -2.32
ALP1P38971 YMR160WYMR160W 2451 nt0.52□□□□□ -2.33
ALP1P38971 STF2YGR008C 255 nt0.52□□□□□ -2.33
ALP1P38971 INA22YIR024C 651 nt0.52□□□□□ -2.33
ALP1P38971 YIL134C-AYIL134C-A 204 nt0.51□□□□□ -2.33
ALP1P38971 FMP27YLR454W 7887 nt0.5□□□□□ -2.33
ALP1P38971 YOR192C-BYOR192C-B 5313 nt0.5□□□□□ -2.33
ALP1P38971 PRP5YBR237W 2550 nt0.5□□□□□ -2.33
ALP1P38971 YJL127W-AYJL127W-A 117 nt0.5□□□□□ -2.33
ALP1P38971 YAL067W-AYAL067W-A 228 nt0.5□□□□□ -2.33
ALP1P38971 YOR029WYOR029W 336 nt0.5□□□□□ -2.33
ALP1P38971 RPS30BYOR182C 192 nt0.5□□□□□ -2.33
ALP1P38971 YPR016W-AYPR016W-A 261 nt0.5□□□□□ -2.33
ALP1P38971 COG8YML071C 1824 nt0.5□□□□□ -2.33
ALP1P38971 RPS27BYHR021C 249 nt0.49□□□□□ -2.33
ALP1P38971 COX5BYIL111W 456 nt0.49□□□□□ -2.33
ALP1P38971 YIL115W-AYIL115W-A 372 nt0.49□□□□□ -2.33
ALP1P38971 YPR012WYPR012W 255 nt0.49□□□□□ -2.33
ALP1P38971 YPR170W-AYPR170W-A 186 nt0.49□□□□□ -2.33
ALP1P38971 YSP1YHR155W 3687 nt0.48□□□□□ -2.33
ALP1P38971 YMR307C-AYMR307C-A 195 nt0.48□□□□□ -2.33
ALP1P38971 YCR018C-AYCR018C-A 255 nt0.47□□□□□ -2.33
ALP1P38971 CSE2YNR010W 450 nt0.47□□□□□ -2.33
ALP1P38971 snR190snR190 190 nt0.47□□□□□ -2.33
ALP1P38971 ULP2YIL031W 3105 nt0.47□□□□□ -2.33
ALP1P38971 MLP1YKR095W 5628 nt0.47□□□□□ -2.33
ALP1P38971 YDL185C-AYDL185C-A 228 nt0.46□□□□□ -2.34
ALP1P38971 OST4YDL232W 111 nt0.46□□□□□ -2.34
ALP1P38971 HUG1YML058W-A 207 nt0.46□□□□□ -2.34
ALP1P38971 IQG1YPL242C 4488 nt0.46□□□□□ -2.34
ALP1P38971 PET111YMR257C 2403 nt0.45□□□□□ -2.34
ALP1P38971 PRP42YDR235W 1635 nt0.45□□□□□ -2.34
ALP1P38971 HTL1YCR020W-B 237 nt0.44□□□□□ -2.34
ALP1P38971 VIK1YPL253C 1944 nt0.42□□□□□ -2.34
ALP1P38971 YDR102CYDR102C 333 nt0.42□□□□□ -2.34
ALP1P38971 YDR354C-AYDR354C-A 144 nt0.42□□□□□ -2.34
ALP1P38971 YJL026C-AYJL026C-A 222 nt0.42□□□□□ -2.34
ALP1P38971 YPL038W-AYPL038W-A 192 nt0.42□□□□□ -2.34
ALP1P38971 YAF9YNL107W 681 nt0.41□□□□□ -2.34
ALP1P38971 PAU12YGR294W 363 nt0.4□□□□□ -2.35
ALP1P38971 YPR197CYPR197C 564 nt0.4□□□□□ -2.35
ALP1P38971 SBH1YER087C-B 249 nt0.39□□□□□ -2.35
ALP1P38971 YKL136WYKL136W 399 nt0.39□□□□□ -2.35
ALP1P38971 MLP2YIL149C 5040 nt0.39□□□□□ -2.35
ALP1P38971 snR60snR60 104 nt0.38□□□□□ -2.35
ALP1P38971 YDR183C-AYDR183C-A 258 nt0.38□□□□□ -2.35
ALP1P38971 YEL020C-BYEL020C-B 198 nt0.38□□□□□ -2.35
ALP1P38971 YIL032CYIL032C 357 nt0.38□□□□□ -2.35
ALP1P38971 YLR282CYLR282C 342 nt0.38□□□□□ -2.35
ALP1P38971 YOR345CYOR345C 351 nt0.36□□□□□ -2.35
ALP1P38971 STE5YDR103W 2754 nt0.36□□□□□ -2.35
ALP1P38971 YCR022CYCR022C 345 nt0.35□□□□□ -2.35
ALP1P38971 ABF2YMR072W 552 nt0.35□□□□□ -2.35
ALP1P38971 BIR1YJR089W 2865 nt0.34□□□□□ -2.35
ALP1P38971 YJL197C-AYJL197C-A 282 nt0.34□□□□□ -2.36
ALP1P38971 YNL054W-BYNL054W-B 5250 nt0.33□□□□□ -2.36
ALP1P38971 ULI1YFR026C 510 nt0.33□□□□□ -2.36
ALP1P38971 tN(GUU)QtN(GUU)Q 71 nt0.33□□□□□ -2.36
ALP1P38971 COY1YKL179C 2040 nt0.32□□□□□ -2.36
ALP1P38971 tF(GAA)BtF(GAA)B 73 nt0.32□□□□□ -2.36
ALP1P38971 tF(GAA)FtF(GAA)F 73 nt0.32□□□□□ -2.36
ALP1P38971 tF(GAA)GtF(GAA)G 73 nt0.32□□□□□ -2.36
ALP1P38971 tF(GAA)H1tF(GAA)H1 73 nt0.32□□□□□ -2.36
ALP1P38971 tF(GAA)H2tF(GAA)H2 73 nt0.32□□□□□ -2.36
ALP1P38971 tF(GAA)MtF(GAA)M 73 nt0.32□□□□□ -2.36
ALP1P38971 tF(GAA)P1tF(GAA)P1 73 nt0.32□□□□□ -2.36
ALP1P38971 tF(GAA)P2tF(GAA)P2 73 nt0.32□□□□□ -2.36
ALP1P38971 YGL149WYGL149W 306 nt0.32□□□□□ -2.36
ALP1P38971 NNF2YGR089W 2811 nt0.31□□□□□ -2.36
ALP1P38971 YDL240C-AYDL240C-A 138 nt0.31□□□□□ -2.36
ALP1P38971 ATP6Q0085 780 nt0.31□□□□□ -2.36
ALP1P38971 YKL100W-AYKL100W-A 90 nt0.31□□□□□ -2.36
ALP1P38971 snR36snR36 182 nt0.31□□□□□ -2.36
ALP1P38971 THO2YNL139C 4794 nt0.3□□□□□ -2.36
ALP1P38971 YFL063WYFL063W 456 nt0.3□□□□□ -2.36
ALP1P38971 BLI1YKL061W 342 nt0.3□□□□□ -2.36
ALP1P38971 YMR193C-AYMR193C-A 387 nt0.3□□□□□ -2.36
ALP1P38971 YNL028WYNL028W 318 nt0.3□□□□□ -2.36
ALP1P38971 YGL123C-AYGL123C-A 231 nt0.29□□□□□ -2.36
ALP1P38971 YPR092WYPR092W 306 nt0.29□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms