Protein–RNA interactions for Protein: P29340

PEX4, Ubiquitin-conjugating enzyme E2-21 kDa, yeastyeast

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX4P29340 SPO21YOL091W 1830 nt0.43□□□□□ -2.34
PEX4P29340 SSS1YDR086C 243 nt0.43□□□□□ -2.34
PEX4P29340 TAR1YLR154W-C 375 nt0.43□□□□□ -2.34
PEX4P29340 YPL225WYPL225W 441 nt0.43□□□□□ -2.34
PEX4P29340 STF2YGR008C 255 nt0.42□□□□□ -2.34
PEX4P29340 RPS30BYOR182C 192 nt0.42□□□□□ -2.34
PEX4P29340 PAA1YDR071C 576 nt0.41□□□□□ -2.34
PEX4P29340 YDR157WYDR157W 402 nt0.41□□□□□ -2.34
PEX4P29340 YHR007C-AYHR007C-A 216 nt0.41□□□□□ -2.34
PEX4P29340 YOR029WYOR029W 336 nt0.41□□□□□ -2.34
PEX4P29340 BIL1YOR304C-A 231 nt0.41□□□□□ -2.34
PEX4P29340 YDR048CYDR048C 315 nt0.4□□□□□ -2.35
PEX4P29340 RPL26BYGR034W 384 nt0.4□□□□□ -2.35
PEX4P29340 YGR035CYGR035C 351 nt0.4□□□□□ -2.35
PEX4P29340 ULP2YIL031W 3105 nt0.39□□□□□ -2.35
PEX4P29340 YOR218CYOR218C 420 nt0.39□□□□□ -2.35
PEX4P29340 YPR016W-AYPR016W-A 261 nt0.39□□□□□ -2.35
PEX4P29340 FYV10YIL097W 1551 nt0.39□□□□□ -2.35
PEX4P29340 UTP20YBL004W 7482 nt0.39□□□□□ -2.35
PEX4P29340 FMP27YLR454W 7887 nt0.39□□□□□ -2.35
PEX4P29340 YDL185C-AYDL185C-A 228 nt0.38□□□□□ -2.35
PEX4P29340 YIL115W-AYIL115W-A 372 nt0.38□□□□□ -2.35
PEX4P29340 HUG1YML058W-A 207 nt0.38□□□□□ -2.35
PEX4P29340 COX5BYIL111W 456 nt0.37□□□□□ -2.35
PEX4P29340 YIL134C-AYIL134C-A 204 nt0.37□□□□□ -2.35
PEX4P29340 YDR118W-AYDR118W-A 117 nt0.36□□□□□ -2.35
PEX4P29340 YHL046W-AYHL046W-A 327 nt0.36□□□□□ -2.35
PEX4P29340 YJL127W-AYJL127W-A 117 nt0.36□□□□□ -2.35
PEX4P29340 YMR321CYMR321C 318 nt0.36□□□□□ -2.35
PEX4P29340 YOR192C-BYOR192C-B 5313 nt0.36□□□□□ -2.35
PEX4P29340 YPR160W-AYPR160W-A 81 nt0.35□□□□□ -2.35
PEX4P29340 COG8YML071C 1824 nt0.35□□□□□ -2.35
PEX4P29340 PRP5YBR237W 2550 nt0.34□□□□□ -2.35
PEX4P29340 YDR354C-AYDR354C-A 144 nt0.34□□□□□ -2.36
PEX4P29340 PAU12YGR294W 363 nt0.33□□□□□ -2.36
PEX4P29340 YAL063C-AYAL063C-A 291 nt0.33□□□□□ -2.36
PEX4P29340 snR190snR190 190 nt0.33□□□□□ -2.36
PEX4P29340 SEC8YPR055W 3198 nt0.33□□□□□ -2.36
PEX4P29340 YCR018C-AYCR018C-A 255 nt0.32□□□□□ -2.36
PEX4P29340 OST4YDL232W 111 nt0.32□□□□□ -2.36
PEX4P29340 PET111YMR257C 2403 nt0.31□□□□□ -2.36
PEX4P29340 YAL067W-AYAL067W-A 228 nt0.31□□□□□ -2.36
PEX4P29340 YSP1YHR155W 3687 nt0.3□□□□□ -2.36
PEX4P29340 SBH1YER087C-B 249 nt0.3□□□□□ -2.36
PEX4P29340 tN(GUU)QtN(GUU)Q 71 nt0.3□□□□□ -2.36
PEX4P29340 RPS27BYHR021C 249 nt0.3□□□□□ -2.36
PEX4P29340 PRP42YDR235W 1635 nt0.29□□□□□ -2.36
PEX4P29340 snR60snR60 104 nt0.29□□□□□ -2.36
PEX4P29340 YLR399W-AYLR399W-A 105 nt0.29□□□□□ -2.36
PEX4P29340 YAF9YNL107W 681 nt0.29□□□□□ -2.36
PEX4P29340 YOR345CYOR345C 351 nt0.29□□□□□ -2.36
PEX4P29340 YFL019CYFL019C 354 nt0.28□□□□□ -2.36
PEX4P29340 YMR307C-AYMR307C-A 195 nt0.28□□□□□ -2.36
PEX4P29340 YPR170W-AYPR170W-A 186 nt0.28□□□□□ -2.36
PEX4P29340 HAL9YOL089C 3093 nt0.28□□□□□ -2.36
PEX4P29340 VIK1YPL253C 1944 nt0.27□□□□□ -2.37
PEX4P29340 YDR102CYDR102C 333 nt0.27□□□□□ -2.37
PEX4P29340 YJL026C-AYJL026C-A 222 nt0.27□□□□□ -2.37
PEX4P29340 COY1YKL179C 2040 nt0.26□□□□□ -2.37
PEX4P29340 ULI1YFR026C 510 nt0.26□□□□□ -2.37
PEX4P29340 YKL136WYKL136W 399 nt0.26□□□□□ -2.37
PEX4P29340 YLR282CYLR282C 342 nt0.26□□□□□ -2.37
PEX4P29340 ABF2YMR072W 552 nt0.26□□□□□ -2.37
PEX4P29340 CSE2YNR010W 450 nt0.26□□□□□ -2.37
PEX4P29340 YPR092WYPR092W 306 nt0.25□□□□□ -2.37
PEX4P29340 YNL054W-BYNL054W-B 5250 nt0.24□□□□□ -2.37
PEX4P29340 YIL032CYIL032C 357 nt0.24□□□□□ -2.37
PEX4P29340 HTL1YCR020W-B 237 nt0.23□□□□□ -2.37
PEX4P29340 YDR371C-AYDR371C-A 105 nt0.23□□□□□ -2.37
PEX4P29340 YOR161W-AYOR161W-A 81 nt0.23□□□□□ -2.37
PEX4P29340 YPR012WYPR012W 255 nt0.23□□□□□ -2.37
PEX4P29340 BEM3YPL115C 3387 nt0.23□□□□□ -2.37
PEX4P29340 ORC3YLL004W 1851 nt0.22□□□□□ -2.37
PEX4P29340 tF(GAA)BtF(GAA)B 73 nt0.22□□□□□ -2.37
PEX4P29340 tF(GAA)FtF(GAA)F 73 nt0.22□□□□□ -2.37
PEX4P29340 tF(GAA)GtF(GAA)G 73 nt0.22□□□□□ -2.37
PEX4P29340 tF(GAA)H1tF(GAA)H1 73 nt0.22□□□□□ -2.37
PEX4P29340 tF(GAA)H2tF(GAA)H2 73 nt0.22□□□□□ -2.37
PEX4P29340 tF(GAA)MtF(GAA)M 73 nt0.22□□□□□ -2.37
PEX4P29340 tF(GAA)P1tF(GAA)P1 73 nt0.22□□□□□ -2.37
PEX4P29340 tF(GAA)P2tF(GAA)P2 73 nt0.22□□□□□ -2.37
PEX4P29340 YPR197CYPR197C 564 nt0.22□□□□□ -2.37
PEX4P29340 IQG1YPL242C 4488 nt0.22□□□□□ -2.37
PEX4P29340 RPS26AYGL189C 360 nt0.21□□□□□ -2.38
PEX4P29340 YKL145W-AYKL145W-A 93 nt0.21□□□□□ -2.38
PEX4P29340 YLL019W-AYLL019W-A 93 nt0.21□□□□□ -2.38
PEX4P29340 snR36snR36 182 nt0.21□□□□□ -2.38
PEX4P29340 BIR1YJR089W 2865 nt0.21□□□□□ -2.38
PEX4P29340 NNF2YGR089W 2811 nt0.21□□□□□ -2.38
PEX4P29340 AI1Q0050 2505 nt0.2□□□□□ -2.38
PEX4P29340 YCR022CYCR022C 345 nt0.2□□□□□ -2.38
PEX4P29340 YDR183C-AYDR183C-A 258 nt0.19□□□□□ -2.38
PEX4P29340 YEL020C-BYEL020C-B 198 nt0.19□□□□□ -2.38
PEX4P29340 YGL123C-AYGL123C-A 231 nt0.19□□□□□ -2.38
PEX4P29340 YJL197C-AYJL197C-A 282 nt0.19□□□□□ -2.38
PEX4P29340 YOR015WYOR015W 360 nt0.18□□□□□ -2.38
PEX4P29340 YPL038W-AYPL038W-A 192 nt0.18□□□□□ -2.38
PEX4P29340 MLP1YKR095W 5628 nt0.17□□□□□ -2.38
PEX4P29340 YFL032WYFL032W 321 nt0.17□□□□□ -2.38
PEX4P29340 YFL063WYFL063W 456 nt0.17□□□□□ -2.38
Retrieved 100 of 7,029 protein–RNA pairs in 6.5 ms