Protein–RNA interactions for Protein: P09547

SWI1, SWI/SNF chromatin-remodeling complex subunit SWI1, yeastyeast

Predictions only

Length 1,314 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWI1P09547 RPL26BYGR034W 384 nt0.44□□□□□ -2.34
SWI1P09547 YNL324WYNL324W 396 nt0.44□□□□□ -2.34
SWI1P09547 BSC3YLR465C 309 nt0.43□□□□□ -2.34
SWI1P09547 YPL068CYPL068C 882 nt0.42□□□□□ -2.34
SWI1P09547 MLP1YKR095W 5628 nt0.41□□□□□ -2.34
SWI1P09547 SEC8YPR055W 3198 nt0.41□□□□□ -2.34
SWI1P09547 YOR011W-AYOR011W-A 207 nt0.4□□□□□ -2.34
SWI1P09547 PRM3YPL192C 402 nt0.4□□□□□ -2.34
SWI1P09547 YNL054W-BYNL054W-B 5250 nt0.4□□□□□ -2.35
SWI1P09547 FYV10YIL097W 1551 nt0.4□□□□□ -2.35
SWI1P09547 ESP1YGR098C 4893 nt0.39□□□□□ -2.35
SWI1P09547 YLR334CYLR334C 381 nt0.38□□□□□ -2.35
SWI1P09547 HAL9YOL089C 3093 nt0.38□□□□□ -2.35
SWI1P09547 ASE1YOR058C 2658 nt0.38□□□□□ -2.35
SWI1P09547 YIL134C-AYIL134C-A 204 nt0.38□□□□□ -2.35
SWI1P09547 YJL127W-AYJL127W-A 117 nt0.38□□□□□ -2.35
SWI1P09547 YBR285WYBR285W 435 nt0.38□□□□□ -2.35
SWI1P09547 MLP2YIL149C 5040 nt0.37□□□□□ -2.35
SWI1P09547 YHL046W-AYHL046W-A 327 nt0.37□□□□□ -2.35
SWI1P09547 YLR399W-AYLR399W-A 105 nt0.37□□□□□ -2.35
SWI1P09547 YNL211CYNL211C 261 nt0.37□□□□□ -2.35
SWI1P09547 AGA2YGL032C 264 nt0.36□□□□□ -2.35
SWI1P09547 COX5BYIL111W 456 nt0.36□□□□□ -2.35
SWI1P09547 YLR264C-AYLR264C-A 117 nt0.36□□□□□ -2.35
SWI1P09547 RPS25BYLR333C 327 nt0.36□□□□□ -2.35
SWI1P09547 YOR121CYOR121C 306 nt0.36□□□□□ -2.35
SWI1P09547 YPR160W-AYPR160W-A 81 nt0.36□□□□□ -2.35
SWI1P09547 YAL067W-AYAL067W-A 228 nt0.35□□□□□ -2.35
SWI1P09547 YPL225WYPL225W 441 nt0.35□□□□□ -2.35
SWI1P09547 PET111YMR257C 2403 nt0.34□□□□□ -2.36
SWI1P09547 YER079WYER079W 633 nt0.34□□□□□ -2.36
SWI1P09547 YJL120WYJL120W 324 nt0.34□□□□□ -2.36
SWI1P09547 YMR001C-AYMR001C-A 231 nt0.34□□□□□ -2.36
SWI1P09547 YHR007C-AYHR007C-A 216 nt0.33□□□□□ -2.36
SWI1P09547 CSN9YDR179C 489 nt0.32□□□□□ -2.36
SWI1P09547 YAR029WYAR029W 225 nt0.32□□□□□ -2.36
SWI1P09547 ABF2YMR072W 552 nt0.32□□□□□ -2.36
SWI1P09547 PRP5YBR237W 2550 nt0.31□□□□□ -2.36
SWI1P09547 YER137W-AYER137W-A 306 nt0.31□□□□□ -2.36
SWI1P09547 YFR012W-AYFR012W-A 87 nt0.31□□□□□ -2.36
SWI1P09547 TAR1YLR154W-C 375 nt0.31□□□□□ -2.36
SWI1P09547 HTB2YBL002W 396 nt0.31□□□□□ -2.36
SWI1P09547 LEE1YPL054W 906 nt0.31□□□□□ -2.36
SWI1P09547 VIK1YPL253C 1944 nt0.31□□□□□ -2.36
SWI1P09547 YHR138CYHR138C 345 nt0.3□□□□□ -2.36
SWI1P09547 YMR307C-AYMR307C-A 195 nt0.3□□□□□ -2.36
SWI1P09547 SGF11YPL047W 300 nt0.3□□□□□ -2.36
SWI1P09547 OST4YDL232W 111 nt0.29□□□□□ -2.36
SWI1P09547 YAR053WYAR053W 297 nt0.29□□□□□ -2.36
SWI1P09547 PRP42YDR235W 1635 nt0.28□□□□□ -2.36
SWI1P09547 SBH1YER087C-B 249 nt0.28□□□□□ -2.36
SWI1P09547 YJR157WYJR157W 363 nt0.27□□□□□ -2.37
SWI1P09547 YAL063C-AYAL063C-A 291 nt0.27□□□□□ -2.37
SWI1P09547 snR190snR190 190 nt0.27□□□□□ -2.37
SWI1P09547 YAL068W-AYAL068W-A 255 nt0.26□□□□□ -2.37
SWI1P09547 YCR018C-AYCR018C-A 255 nt0.25□□□□□ -2.37
SWI1P09547 BIL1YOR304C-A 231 nt0.24□□□□□ -2.37
SWI1P09547 RPL35AYDL191W 363 nt0.23□□□□□ -2.37
SWI1P09547 YBL100W-BYBL100W-B 5313 nt0.23□□□□□ -2.37
SWI1P09547 PRP39YML046W 1890 nt0.23□□□□□ -2.37
SWI1P09547 YDL185C-AYDL185C-A 228 nt0.21□□□□□ -2.38
SWI1P09547 SSS1YDR086C 243 nt0.19□□□□□ -2.38
SWI1P09547 YLR154W-FYLR154W-F 141 nt0.19□□□□□ -2.38
SWI1P09547 CSE2YNR010W 450 nt0.19□□□□□ -2.38
SWI1P09547 YJL113WYJL113W 4647 nt0.19□□□□□ -2.38
SWI1P09547 TAH1YCR060W 336 nt0.18□□□□□ -2.38
SWI1P09547 YGR035CYGR035C 351 nt0.18□□□□□ -2.38
SWI1P09547 RPS27BYHR021C 249 nt0.18□□□□□ -2.38
SWI1P09547 NNF2YGR089W 2811 nt0.18□□□□□ -2.38
SWI1P09547 COG8YML071C 1824 nt0.17□□□□□ -2.38
SWI1P09547 tW(UCA)QtW(UCA)Q 74 nt0.17□□□□□ -2.38
SWI1P09547 YKL136WYKL136W 399 nt0.17□□□□□ -2.38
SWI1P09547 YOL013W-AYOL013W-A 192 nt0.17□□□□□ -2.38
SWI1P09547 YOR345CYOR345C 351 nt0.17□□□□□ -2.38
SWI1P09547 YDR048CYDR048C 315 nt0.16□□□□□ -2.38
SWI1P09547 YLR282CYLR282C 342 nt0.16□□□□□ -2.38
SWI1P09547 YOR293C-AYOR293C-A 150 nt0.16□□□□□ -2.38
SWI1P09547 YDR354C-AYDR354C-A 144 nt0.15□□□□□ -2.38
SWI1P09547 YDR371C-AYDR371C-A 105 nt0.15□□□□□ -2.38
SWI1P09547 tN(GUU)QtN(GUU)Q 71 nt0.15□□□□□ -2.38
SWI1P09547 YLR222C-AYLR222C-A 231 nt0.15□□□□□ -2.38
SWI1P09547 YCR022CYCR022C 345 nt0.14□□□□□ -2.39
SWI1P09547 RPS26AYGL189C 360 nt0.14□□□□□ -2.39
SWI1P09547 YIL115W-AYIL115W-A 372 nt0.14□□□□□ -2.39
SWI1P09547 YJL026C-AYJL026C-A 222 nt0.14□□□□□ -2.39
SWI1P09547 YEL020C-BYEL020C-B 198 nt0.13□□□□□ -2.39
SWI1P09547 YKL100W-AYKL100W-A 90 nt0.13□□□□□ -2.39
SWI1P09547 snR45snR45 172 nt0.13□□□□□ -2.39
SWI1P09547 NIP1YMR309C 2439 nt0.12□□□□□ -2.39
SWI1P09547 ULI1YFR026C 510 nt0.12□□□□□ -2.39
SWI1P09547 YOR186C-AYOR186C-A 210 nt0.12□□□□□ -2.39
SWI1P09547 RCO1YMR075W 2055 nt0.11□□□□□ -2.39
SWI1P09547 YDR157WYDR157W 402 nt0.11□□□□□ -2.39
SWI1P09547 ORC3YLL004W 1851 nt0.1□□□□□ -2.39
SWI1P09547 COY1YKL179C 2040 nt0.1□□□□□ -2.39
SWI1P09547 Q0144Q0144 330 nt0.1□□□□□ -2.39
SWI1P09547 YNL146WYNL146W 303 nt0.1□□□□□ -2.39
SWI1P09547 YGL123C-AYGL123C-A 231 nt0.08□□□□□ -2.4
SWI1P09547 BLI1YKL061W 342 nt0.08□□□□□ -2.4
SWI1P09547 YPR092WYPR092W 306 nt0.08□□□□□ -2.4
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms