Protein–RNA interactions for Protein: P06844

SPT3, Protein SPT3, yeastyeast

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT3P06844 SEC8YPR055W 3198 nt0.18□□□□□ -2.38
SPT3P06844 YLR456WYLR456W 615 nt0.18□□□□□ -2.38
SPT3P06844 OST4YDL232W 111 nt0.17□□□□□ -2.38
SPT3P06844 YOR053WYOR053W 342 nt0.17□□□□□ -2.38
SPT3P06844 SGF11YPL047W 300 nt0.17□□□□□ -2.38
SPT3P06844 HMRA2YCR096C 360 nt0.16□□□□□ -2.38
SPT3P06844 PCC1YKR095W-A 267 nt0.16□□□□□ -2.38
SPT3P06844 PRP42YDR235W 1635 nt0.16□□□□□ -2.38
SPT3P06844 MLP1YKR095W 5628 nt0.15□□□□□ -2.38
SPT3P06844 YHL046W-AYHL046W-A 327 nt0.15□□□□□ -2.39
SPT3P06844 YPL068CYPL068C 882 nt0.15□□□□□ -2.39
SPT3P06844 YLR399W-AYLR399W-A 105 nt0.14□□□□□ -2.39
SPT3P06844 YOL013W-AYOL013W-A 192 nt0.14□□□□□ -2.39
SPT3P06844 YAL067W-AYAL067W-A 228 nt0.13□□□□□ -2.39
SPT3P06844 TAR1YLR154W-C 375 nt0.12□□□□□ -2.39
SPT3P06844 YPL225WYPL225W 441 nt0.12□□□□□ -2.39
SPT3P06844 YDL185C-AYDL185C-A 228 nt0.11□□□□□ -2.39
SPT3P06844 YLR334CYLR334C 381 nt0.11□□□□□ -2.39
SPT3P06844 ORC3YLL004W 1851 nt0.1□□□□□ -2.39
SPT3P06844 snR190snR190 190 nt0.1□□□□□ -2.39
SPT3P06844 YCR018C-AYCR018C-A 255 nt0.09□□□□□ -2.4
SPT3P06844 YOR345CYOR345C 351 nt0.09□□□□□ -2.4
SPT3P06844 HAL9YOL089C 3093 nt0.08□□□□□ -2.4
SPT3P06844 YDR371C-AYDR371C-A 105 nt0.08□□□□□ -2.4
SPT3P06844 YAL016C-BYAL016C-B 186 nt0.08□□□□□ -2.4
SPT3P06844 RPS25BYLR333C 327 nt0.08□□□□□ -2.4
SPT3P06844 ATP19YOL077W-A 207 nt0.08□□□□□ -2.4
SPT3P06844 LEE1YPL054W 906 nt0.08□□□□□ -2.4
SPT3P06844 STE5YDR103W 2754 nt0.07□□□□□ -2.4
SPT3P06844 YNL303WYNL303W 348 nt0.07□□□□□ -2.4
SPT3P06844 tN(GUU)QtN(GUU)Q 71 nt0.06□□□□□ -2.4
SPT3P06844 COX12YLR038C 252 nt0.06□□□□□ -2.4
SPT3P06844 RPS26AYGL189C 360 nt0.05□□□□□ -2.4
SPT3P06844 YJL120WYJL120W 324 nt0.05□□□□□ -2.4
SPT3P06844 snR189snR189 189 nt0.05□□□□□ -2.4
SPT3P06844 NNF2YGR089W 2811 nt0.05□□□□□ -2.4
SPT3P06844 YHR007C-AYHR007C-A 216 nt0.04□□□□□ -2.4
SPT3P06844 YLR434CYLR434C 384 nt0.04□□□□□ -2.4
SPT3P06844 YMR307C-AYMR307C-A 195 nt0.04□□□□□ -2.4
SPT3P06844 RCO1YMR075W 2055 nt0.03□□□□□ -2.4
SPT3P06844 YAR029WYAR029W 225 nt0.03□□□□□ -2.4
SPT3P06844 VPS20YMR077C 666 nt0.03□□□□□ -2.4
SPT3P06844 CSN9YDR179C 489 nt0.02□□□□□ -2.41
SPT3P06844 YHR138CYHR138C 345 nt0.02□□□□□ -2.41
SPT3P06844 YNL146WYNL146W 303 nt0.02□□□□□ -2.41
SPT3P06844 YER078W-AYER078W-A 165 nt0□□□□□ -2.41
SPT3P06844 YLR406C-AYLR406C-A 150 nt-0.03□□□□□ -2.41
SPT3P06844 YPR092WYPR092W 306 nt-0.03□□□□□ -2.41
SPT3P06844 YOR186C-AYOR186C-A 210 nt-0.04□□□□□ -2.42
SPT3P06844 NIP1YMR309C 2439 nt-0.04□□□□□ -2.42
SPT3P06844 YDR354C-AYDR354C-A 144 nt-0.06□□□□□ -2.42
SPT3P06844 ULI1YFR026C 510 nt-0.06□□□□□ -2.42
SPT3P06844 YKL136WYKL136W 399 nt-0.06□□□□□ -2.42
SPT3P06844 THO2YNL139C 4794 nt-0.06□□□□□ -2.42
SPT3P06844 YLR282CYLR282C 342 nt-0.07□□□□□ -2.42
SPT3P06844 SSS1YDR086C 243 nt-0.08□□□□□ -2.42
SPT3P06844 YHR131W-AYHR131W-A 246 nt-0.09□□□□□ -2.42
SPT3P06844 YLL006W-AYLL006W-A 177 nt-0.09□□□□□ -2.42
SPT3P06844 YLR232WYLR232W 348 nt-0.09□□□□□ -2.42
SPT3P06844 COY1YKL179C 2040 nt-0.09□□□□□ -2.42
SPT3P06844 COG8YML071C 1824 nt-0.1□□□□□ -2.43
SPT3P06844 YCR022CYCR022C 345 nt-0.1□□□□□ -2.43
SPT3P06844 YJL007CYJL007C 315 nt-0.1□□□□□ -2.43
SPT3P06844 PRM3YPL192C 402 nt-0.1□□□□□ -2.43
SPT3P06844 snR45snR45 172 nt-0.1□□□□□ -2.43
SPT3P06844 RPL35AYDL191W 363 nt-0.11□□□□□ -2.43
SPT3P06844 YLR202CYLR202C 327 nt-0.11□□□□□ -2.43
SPT3P06844 YKU70YMR284W 1809 nt-0.11□□□□□ -2.43
SPT3P06844 YER137W-AYER137W-A 306 nt-0.12□□□□□ -2.43
SPT3P06844 YKL063CYKL063C 504 nt-0.12□□□□□ -2.43
SPT3P06844 HTB2YBL002W 396 nt-0.12□□□□□ -2.43
SPT3P06844 BUL2YML111W 2763 nt-0.12□□□□□ -2.43
SPT3P06844 YPL205CYPL205C 345 nt-0.13□□□□□ -2.43
SPT3P06844 YJL026C-AYJL026C-A 222 nt-0.14□□□□□ -2.43
SPT3P06844 YOR161W-AYOR161W-A 81 nt-0.14□□□□□ -2.43
SPT3P06844 YBR285WYBR285W 435 nt-0.15□□□□□ -2.43
SPT3P06844 YAR053WYAR053W 297 nt-0.16□□□□□ -2.44
SPT3P06844 YEL073CYEL073C 324 nt-0.17□□□□□ -2.44
SPT3P06844 RPS27BYHR021C 249 nt-0.18□□□□□ -2.44
SPT3P06844 tW(UCA)QtW(UCA)Q 74 nt-0.18□□□□□ -2.44
SPT3P06844 YIL115W-AYIL115W-A 372 nt-0.18□□□□□ -2.44
SPT3P06844 YOR121CYOR121C 306 nt-0.18□□□□□ -2.44
SPT3P06844 YER079WYER079W 633 nt-0.19□□□□□ -2.44
SPT3P06844 YGL123C-AYGL123C-A 231 nt-0.19□□□□□ -2.44
SPT3P06844 YDR048CYDR048C 315 nt-0.2□□□□□ -2.44
SPT3P06844 YDR210WYDR210W 228 nt-0.2□□□□□ -2.44
SPT3P06844 CSE2YNR010W 450 nt-0.2□□□□□ -2.44
SPT3P06844 SOV1YMR066W 2697 nt-0.2□□□□□ -2.44
SPT3P06844 SNU13YEL026W 381 nt-0.21□□□□□ -2.44
SPT3P06844 BLI1YKL061W 342 nt-0.21□□□□□ -2.44
SPT3P06844 YMR001C-AYMR001C-A 231 nt-0.21□□□□□ -2.44
SPT3P06844 YEL020C-BYEL020C-B 198 nt-0.22□□□□□ -2.44
SPT3P06844 snR128snR128 126 nt-0.24□□□□□ -2.45
SPT3P06844 YJL113WYJL113W 4647 nt-0.25□□□□□ -2.45
SPT3P06844 YDR366CYDR366C 399 nt-0.25□□□□□ -2.45
SPT3P06844 AGA2YGL032C 264 nt-0.25□□□□□ -2.45
SPT3P06844 YLR041WYLR041W 321 nt-0.26□□□□□ -2.45
SPT3P06844 snR8snR8 190 nt-0.27□□□□□ -2.45
SPT3P06844 YKL100W-AYKL100W-A 90 nt-0.27□□□□□ -2.45
SPT3P06844 YBR072C-AYBR072C-A 162 nt-0.27□□□□□ -2.45
Retrieved 100 of 7,029 protein–RNA pairs in 22.8 ms