Protein–RNA interactions for Protein: P02381

VAR1, Ribosomal protein VAR1, mitochondrial, yeastyeast

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAR1P02381 YOR282WYOR282W 321 nt0.35□□□□□ -2.35
VAR1P02381 YPL044CYPL044C 549 nt0.35□□□□□ -2.35
VAR1P02381 SPO21YOL091W 1830 nt0.34□□□□□ -2.35
VAR1P02381 UTP20YBL004W 7482 nt0.34□□□□□ -2.35
VAR1P02381 RPL26BYGR034W 384 nt0.34□□□□□ -2.36
VAR1P02381 YLR154W-FYLR154W-F 141 nt0.34□□□□□ -2.36
VAR1P02381 HTB2YBL002W 396 nt0.34□□□□□ -2.36
VAR1P02381 RPS30BYOR182C 192 nt0.34□□□□□ -2.36
VAR1P02381 YPL225WYPL225W 441 nt0.34□□□□□ -2.36
VAR1P02381 YDL185C-AYDL185C-A 228 nt0.33□□□□□ -2.36
VAR1P02381 STF2YGR008C 255 nt0.33□□□□□ -2.36
VAR1P02381 YJL120WYJL120W 324 nt0.33□□□□□ -2.36
VAR1P02381 YMR321CYMR321C 318 nt0.33□□□□□ -2.36
VAR1P02381 YSP1YHR155W 3687 nt0.33□□□□□ -2.36
VAR1P02381 YIL115W-AYIL115W-A 372 nt0.32□□□□□ -2.36
VAR1P02381 YOR218CYOR218C 420 nt0.32□□□□□ -2.36
VAR1P02381 YPR016W-AYPR016W-A 261 nt0.32□□□□□ -2.36
VAR1P02381 ULP2YIL031W 3105 nt0.32□□□□□ -2.36
VAR1P02381 HMRA2YCR096C 360 nt0.31□□□□□ -2.36
VAR1P02381 YIL134C-AYIL134C-A 204 nt0.31□□□□□ -2.36
VAR1P02381 YDR157WYDR157W 402 nt0.3□□□□□ -2.36
VAR1P02381 YDR354C-AYDR354C-A 144 nt0.3□□□□□ -2.36
VAR1P02381 YHR007C-AYHR007C-A 216 nt0.3□□□□□ -2.36
VAR1P02381 FYV10YIL097W 1551 nt0.29□□□□□ -2.36
VAR1P02381 YGR035CYGR035C 351 nt0.29□□□□□ -2.36
VAR1P02381 BIL1YOR304C-A 231 nt0.29□□□□□ -2.36
VAR1P02381 COG8YML071C 1824 nt0.29□□□□□ -2.36
VAR1P02381 YDR118W-AYDR118W-A 117 nt0.28□□□□□ -2.36
VAR1P02381 YJL127W-AYJL127W-A 117 nt0.28□□□□□ -2.36
VAR1P02381 HUG1YML058W-A 207 nt0.28□□□□□ -2.36
VAR1P02381 PRP5YBR237W 2550 nt0.27□□□□□ -2.37
VAR1P02381 PAA1YDR071C 576 nt0.27□□□□□ -2.37
VAR1P02381 tN(GUU)QtN(GUU)Q 71 nt0.27□□□□□ -2.37
VAR1P02381 PAU12YGR294W 363 nt0.27□□□□□ -2.37
VAR1P02381 COX5BYIL111W 456 nt0.27□□□□□ -2.37
VAR1P02381 ABF2YMR072W 552 nt0.27□□□□□ -2.37
VAR1P02381 YAF9YNL107W 681 nt0.27□□□□□ -2.37
VAR1P02381 YCR018C-AYCR018C-A 255 nt0.26□□□□□ -2.37
VAR1P02381 snR60snR60 104 nt0.26□□□□□ -2.37
VAR1P02381 SBH1YER087C-B 249 nt0.26□□□□□ -2.37
VAR1P02381 snR190snR190 190 nt0.26□□□□□ -2.37
VAR1P02381 YHL046W-AYHL046W-A 327 nt0.25□□□□□ -2.37
VAR1P02381 YOR345CYOR345C 351 nt0.25□□□□□ -2.37
VAR1P02381 YPR092WYPR092W 306 nt0.25□□□□□ -2.37
VAR1P02381 YPR160W-AYPR160W-A 81 nt0.25□□□□□ -2.37
VAR1P02381 STE5YDR103W 2754 nt0.24□□□□□ -2.37
VAR1P02381 PET111YMR257C 2403 nt0.24□□□□□ -2.37
VAR1P02381 COY1YKL179C 2040 nt0.24□□□□□ -2.37
VAR1P02381 OST4YDL232W 111 nt0.23□□□□□ -2.37
VAR1P02381 YOR161W-AYOR161W-A 81 nt0.23□□□□□ -2.37
VAR1P02381 BIR1YJR089W 2865 nt0.23□□□□□ -2.37
VAR1P02381 ORC3YLL004W 1851 nt0.22□□□□□ -2.37
VAR1P02381 RPS27BYHR021C 249 nt0.22□□□□□ -2.37
VAR1P02381 YAL067W-AYAL067W-A 228 nt0.22□□□□□ -2.37
VAR1P02381 PRP42YDR235W 1635 nt0.22□□□□□ -2.37
VAR1P02381 VIK1YPL253C 1944 nt0.22□□□□□ -2.37
VAR1P02381 IQG1YPL242C 4488 nt0.21□□□□□ -2.38
VAR1P02381 YDR102CYDR102C 333 nt0.21□□□□□ -2.38
VAR1P02381 ULI1YFR026C 510 nt0.21□□□□□ -2.38
VAR1P02381 BEM3YPL115C 3387 nt0.21□□□□□ -2.38
VAR1P02381 SEC8YPR055W 3198 nt0.2□□□□□ -2.38
VAR1P02381 YBL100W-BYBL100W-B 5313 nt0.2□□□□□ -2.38
VAR1P02381 YIL032CYIL032C 357 nt0.2□□□□□ -2.38
VAR1P02381 YJL026C-AYJL026C-A 222 nt0.2□□□□□ -2.38
VAR1P02381 YKL136WYKL136W 399 nt0.2□□□□□ -2.38
VAR1P02381 YLL019W-AYLL019W-A 93 nt0.2□□□□□ -2.38
VAR1P02381 YLR282CYLR282C 342 nt0.2□□□□□ -2.38
VAR1P02381 YPR170W-AYPR170W-A 186 nt0.2□□□□□ -2.38
VAR1P02381 ESP1YGR098C 4893 nt0.19□□□□□ -2.38
VAR1P02381 AI1Q0050 2505 nt0.19□□□□□ -2.38
VAR1P02381 YDR371C-AYDR371C-A 105 nt0.19□□□□□ -2.38
VAR1P02381 YFL019CYFL019C 354 nt0.19□□□□□ -2.38
VAR1P02381 YKL145W-AYKL145W-A 93 nt0.19□□□□□ -2.38
VAR1P02381 YAL063C-AYAL063C-A 291 nt0.19□□□□□ -2.38
VAR1P02381 snR36snR36 182 nt0.19□□□□□ -2.38
VAR1P02381 YMR307C-AYMR307C-A 195 nt0.18□□□□□ -2.38
VAR1P02381 CSE2YNR010W 450 nt0.18□□□□□ -2.38
VAR1P02381 YOR015WYOR015W 360 nt0.18□□□□□ -2.38
VAR1P02381 YNL054W-BYNL054W-B 5250 nt0.17□□□□□ -2.38
VAR1P02381 YLR399W-AYLR399W-A 105 nt0.17□□□□□ -2.38
VAR1P02381 YPR197CYPR197C 564 nt0.17□□□□□ -2.38
VAR1P02381 tF(GAA)BtF(GAA)B 73 nt0.16□□□□□ -2.38
VAR1P02381 tF(GAA)FtF(GAA)F 73 nt0.16□□□□□ -2.38
VAR1P02381 tF(GAA)GtF(GAA)G 73 nt0.16□□□□□ -2.38
VAR1P02381 tF(GAA)H1tF(GAA)H1 73 nt0.16□□□□□ -2.38
VAR1P02381 tF(GAA)H2tF(GAA)H2 73 nt0.16□□□□□ -2.38
VAR1P02381 tF(GAA)MtF(GAA)M 73 nt0.16□□□□□ -2.38
VAR1P02381 tF(GAA)P1tF(GAA)P1 73 nt0.16□□□□□ -2.38
VAR1P02381 tF(GAA)P2tF(GAA)P2 73 nt0.16□□□□□ -2.38
VAR1P02381 YFL032WYFL032W 321 nt0.16□□□□□ -2.38
VAR1P02381 RPS26AYGL189C 360 nt0.16□□□□□ -2.38
VAR1P02381 NNF2YGR089W 2811 nt0.16□□□□□ -2.38
VAR1P02381 YGL123C-AYGL123C-A 231 nt0.15□□□□□ -2.39
VAR1P02381 HTL1YCR020W-B 237 nt0.14□□□□□ -2.39
VAR1P02381 YCR022CYCR022C 345 nt0.14□□□□□ -2.39
VAR1P02381 YGR069WYGR069W 336 nt0.14□□□□□ -2.39
VAR1P02381 YJL197C-AYJL197C-A 282 nt0.14□□□□□ -2.39
VAR1P02381 YMR193C-AYMR193C-A 387 nt0.14□□□□□ -2.39
VAR1P02381 YPR012WYPR012W 255 nt0.14□□□□□ -2.39
VAR1P02381 snR74snR74 88 nt0.13□□□□□ -2.39
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms