Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
SSX3Q99909 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC6.38□□□□□ -1.39
SSX3Q99909 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.38□□□□□ -1.39
SSX3Q99909 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSX3Q99909 RNA5SP149-201ENST00000364952 92 ntBASIC6.38□□□□□ -1.39
SSX3Q99909 SNORA7B-201ENST00000384360 139 ntBASIC6.38□□□□□ -1.39
SSX3Q99909 PKMP3-201ENST00000405497 715 ntBASIC6.38□□□□□ -1.39
SSX3Q99909 AL008626.1-201ENST00000412357 775 ntTSL 2 BASIC6.38□□□□□ -1.39
SSX3Q99909 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC6.38□□□□□ -1.39
SSX3Q99909 RPE-205ENST00000429907 925 ntTSL 2 BASIC6.38□□□□□ -1.39
SSX3Q99909 GCNT1P5-201ENST00000449274 682 ntBASIC6.38□□□□□ -1.39
SSX3Q99909 AC093157.1-205ENST00000449473 1298 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSX3Q99909 RPL10P6-201ENST00000457497 318 ntBASIC6.38□□□□□ -1.39
SSX3Q99909 AL590326.1-201ENST00000460857 334 ntBASIC6.38□□□□□ -1.39
SSX3Q99909 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSX3Q99909 RN7SL314P-201ENST00000490735 292 ntBASIC6.38□□□□□ -1.39
SSX3Q99909 AL355076.3-201ENST00000555838 587 ntBASIC6.38□□□□□ -1.39
SSX3Q99909 UBE2CP1-201ENST00000557130 554 ntBASIC6.38□□□□□ -1.39
SSX3Q99909 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC6.38□□□□□ -1.39
SSX3Q99909 AC016405.2-201ENST00000607393 312 ntBASIC6.38□□□□□ -1.39
SSX3Q99909 AC020910.4-201ENST00000612269 540 ntBASIC6.38□□□□□ -1.39
SSX3Q99909 AL133351.5-201ENST00000612789 106 ntBASIC6.38□□□□□ -1.39
SSX3Q99909 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.38□□□□□ -1.39
SSX3Q99909 AP003789.1-201ENST00000617737 605 ntBASIC6.38□□□□□ -1.39
SSX3Q99909 AL390882.1-201ENST00000618821 594 ntBASIC6.38□□□□□ -1.39
SSX3Q99909 ZCCHC17-209ENST00000627541 1158 ntTSL 5 BASIC6.38□□□□□ -1.39
SSX3Q99909 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SSX3Q99909 TPK1-214ENST00000639328 826 ntTSL 5 BASIC6.38□□□□□ -1.39
SSX3Q99909 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSX3Q99909 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSX3Q99909 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSX3Q99909 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
SSX3Q99909 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
SSX3Q99909 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSX3Q99909 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSX3Q99909 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.38□□□□□ -1.39
SSX3Q99909 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SSX3Q99909 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSX3Q99909 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.38□□□□□ -1.39
SSX3Q99909 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
SSX3Q99909 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.38□□□□□ -1.39
SSX3Q99909 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.38□□□□□ -1.39
SSX3Q99909 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSX3Q99909 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.38□□□□□ -1.39
SSX3Q99909 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SSX3Q99909 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
SSX3Q99909 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SSX3Q99909 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC6.37□□□□□ -1.39
SSX3Q99909 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSX3Q99909 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC6.37□□□□□ -1.39
SSX3Q99909 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SSX3Q99909 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSX3Q99909 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSX3Q99909 AL078595.2-201ENST00000605309 1780 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSX3Q99909 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSX3Q99909 AC073324.1-201ENST00000425993 1435 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSX3Q99909 TRAV35-201ENST00000390462 330 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 RNA5SP297-201ENST00000391029 113 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 MORN2-202ENST00000409077 465 ntTSL 5 BASIC6.37□□□□□ -1.39
SSX3Q99909 MED15P8-201ENST00000411601 545 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 ST13P13-201ENST00000417082 1092 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 AC011753.4-201ENST00000417974 311 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC6.37□□□□□ -1.39
SSX3Q99909 CLCN3P1-201ENST00000423965 1017 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC6.37□□□□□ -1.39
SSX3Q99909 PRPS1P2-201ENST00000430496 937 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 AL606752.1-201ENST00000435442 666 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 MRPS21P3-201ENST00000436696 262 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC6.37□□□□□ -1.39
SSX3Q99909 AL353754.1-201ENST00000440219 340 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
SSX3Q99909 ATP5G1P6-201ENST00000451206 412 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 YAP1P2-201ENST00000455104 610 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 ZBTB20-AS4-201ENST00000472323 675 ntTSL 3 BASIC6.37□□□□□ -1.39
SSX3Q99909 CEACAMP3-202ENST00000483806 638 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC6.37□□□□□ -1.39
SSX3Q99909 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSX3Q99909 RN7SL416P-201ENST00000494042 298 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC6.37□□□□□ -1.39
SSX3Q99909 AC090835.1-201ENST00000515189 1024 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 RN7SKP98-201ENST00000517070 156 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC6.37□□□□□ -1.39
SSX3Q99909 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC6.37□□□□□ -1.39
SSX3Q99909 AP000445.1-201ENST00000526692 741 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC6.37□□□□□ -1.39
SSX3Q99909 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC6.37□□□□□ -1.39
SSX3Q99909 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC6.37□□□□□ -1.39
SSX3Q99909 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC6.37□□□□□ -1.39
SSX3Q99909 AC142086.3-201ENST00000563896 802 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 AC018558.5-201ENST00000565840 952 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 RN7SL14P-201ENST00000579715 298 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC6.37□□□□□ -1.39
SSX3Q99909 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC6.37□□□□□ -1.39
SSX3Q99909 RIT2-202ENST00000589109 1156 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSX3Q99909 AC004918.3-201ENST00000602609 925 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 RN7SL715P-201ENST00000606972 286 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 MIR6829-201ENST00000620375 67 ntBASIC6.37□□□□□ -1.39
SSX3Q99909 AC010809.3-201ENST00000621310 641 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms