Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 DNAAF4-203ENST00000448430 1445 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 DDX50P1-201ENST00000438163 2400 ntBASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 CCNT2P1-201ENST00000423082 1315 ntBASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 TATDN2P1-201ENST00000443767 2331 ntBASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 DPM1-201ENST00000371582 1161 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 NUS1P4-201ENST00000401550 585 ntBASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 GSTA10P-201ENST00000412182 576 ntBASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 SFR1P2-201ENST00000421841 730 ntBASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 HSFY7P-201ENST00000432672 318 ntBASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 AC010086.1-201ENST00000437359 1052 ntBASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 HSFY8P-201ENST00000437934 318 ntBASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 MTND2P3-201ENST00000452458 470 ntBASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 HSFY5P-201ENST00000453726 309 ntBASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 RN7SL145P-201ENST00000469955 296 ntBASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 RN7SL182P-201ENST00000496499 300 ntBASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 AC112206.4-201ENST00000515142 405 ntBASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 OR4A46P-201ENST00000527255 933 ntBASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 AP001781.2-201ENST00000529841 783 ntTSL 3 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 AL451085.1-201ENST00000604546 690 ntBASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 AC004852.1-201ENST00000605206 154 ntBASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 AC073529.1-202ENST00000608576 1080 ntTSL 5 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 MAPK10-333ENST00000641607 2481 ntBASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDK5RAP1Q96SZ6 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 DDX10P2-201ENST00000417796 2614 ntBASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 ZNF713-206ENST00000633730 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 PTMAP8-201ENST00000397729 342 ntBASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AC020983.1-201ENST00000417063 543 ntBASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 RPL6P2-201ENST00000425480 783 ntBASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AC244505.2-201ENST00000435089 759 ntBASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 GTF2F2P2-201ENST00000445825 721 ntBASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 GXYLT1P1-201ENST00000446657 490 ntBASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AC114755.1-201ENST00000453101 868 ntBASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AL390026.1-201ENST00000456647 457 ntBASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AL049869.4-201ENST00000555669 178 ntBASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AC013457.1-201ENST00000556770 1011 ntTSL 3 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AC007423.1-201ENST00000605009 627 ntBASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AC084782.3-201ENST00000612282 578 ntBASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 AC079414.3-201ENST00000612986 1090 ntBASIC7.87□□□□□ -1.15
CDK5RAP1Q96SZ6 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms