Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 RBM22P5-201ENST00000449536 1277 ntBASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 C15orf40-202ENST00000451195 518 ntTSL 3 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 DBIL5P-202ENST00000453414 250 ntBASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 LINC02365-203ENST00000522554 802 ntTSL 2 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 IGLVI-70-201ENST00000523272 390 ntBASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 ZNF345-205ENST00000526123 458 ntTSL 3 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 AL136088.1-201ENST00000531002 541 ntTSL 4 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 SAA3P-201ENST00000533267 365 ntBASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 AC084033.2-201ENST00000551532 967 ntBASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 OR11J5P-201ENST00000556889 934 ntBASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 AC034105.2-201ENST00000561866 238 ntBASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 APOC2-204ENST00000591597 447 ntTSL 5 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 AL133351.5-201ENST00000612789 106 ntBASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 AC143336.1-201ENST00000614164 836 ntBASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 LINC01482-201ENST00000585484 2616 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 MFSD8-243ENST00000641695 1455 ntBASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 SLC16A1P1-201ENST00000486743 1510 ntBASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.91□□□□□ -1.3
CCNB1IP1Q9NPC3 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 PPIH-203ENST00000372550 665 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 VN1R13P-201ENST00000406212 885 ntBASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 ST13P13-201ENST00000417082 1092 ntBASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 BRWD1-AS1-201ENST00000423274 691 ntTSL 4 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 CICP10-201ENST00000439497 198 ntBASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 AC011742.2-201ENST00000443818 352 ntBASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 AC098828.2-201ENST00000452342 573 ntTSL 2 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 AL590326.1-201ENST00000460857 334 ntBASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 ZBTB20-AS4-201ENST00000472323 675 ntTSL 3 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 RN7SL241P-201ENST00000482973 236 ntBASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 AL355076.1-201ENST00000484315 270 ntBASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 RPL34P29-201ENST00000491411 325 ntBASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 RN7SL416P-201ENST00000494042 298 ntBASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 NTAN1P2-201ENST00000515730 940 ntBASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 MTND6P19-201ENST00000519399 524 ntBASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 IGKV2OR22-4-201ENST00000523309 367 ntBASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 AC009630.2-201ENST00000524133 570 ntTSL 5 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 AC098850.2-201ENST00000578710 686 ntTSL 5 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 AC006547.1-208ENST00000598339 805 ntTSL 5 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 AC018737.1-201ENST00000603900 204 ntBASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 AC140658.6-201ENST00000603958 201 ntBASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 AC139493.1-201ENST00000604368 397 ntBASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 AL451085.1-201ENST00000604546 690 ntBASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 AL451054.1-201ENST00000621770 772 ntBASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 TPK1-214ENST00000639328 826 ntTSL 5 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 TRIM64EP-201ENST00000531233 1307 ntBASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCNB1IP1Q9NPC3 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CCNB1IP1Q9NPC3 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
CCNB1IP1Q9NPC3 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.9□□□□□ -1.31
CCNB1IP1Q9NPC3 LPAL2-203ENST00000454031 2498 ntBASIC6.9□□□□□ -1.31
CCNB1IP1Q9NPC3 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
CCNB1IP1Q9NPC3 AC009237.3-203ENST00000442128 3551 ntBASIC6.9□□□□□ -1.31
CCNB1IP1Q9NPC3 UBE2U-206ENST00000611228 1550 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
CCNB1IP1Q9NPC3 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
CCNB1IP1Q9NPC3 AL353795.1-201ENST00000439134 1775 ntBASIC6.9□□□□□ -1.31
CCNB1IP1Q9NPC3 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.9□□□□□ -1.31
CCNB1IP1Q9NPC3 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
CCNB1IP1Q9NPC3 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CCNB1IP1Q9NPC3 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 196.1 ms