Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.49□□□□□ -1.37
SSX3Q99909 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SSX3Q99909 RN7SL201P-201ENST00000482306 296 ntBASIC6.49□□□□□ -1.37
SSX3Q99909 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC6.49□□□□□ -1.37
SSX3Q99909 AC008592.1-201ENST00000503091 665 ntTSL 3 BASIC6.49□□□□□ -1.37
SSX3Q99909 AL645924.2-201ENST00000508865 900 ntBASIC6.49□□□□□ -1.37
SSX3Q99909 AC083906.4-201ENST00000514634 987 ntBASIC6.49□□□□□ -1.37
SSX3Q99909 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX3Q99909 AC091096.1-201ENST00000521955 614 ntTSL 3 BASIC6.49□□□□□ -1.37
SSX3Q99909 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC6.49□□□□□ -1.37
SSX3Q99909 AC025437.1-201ENST00000523820 346 ntTSL 2 BASIC6.49□□□□□ -1.37
SSX3Q99909 AL136088.1-201ENST00000531002 541 ntTSL 4 BASIC6.49□□□□□ -1.37
SSX3Q99909 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC6.49□□□□□ -1.37
SSX3Q99909 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC6.49□□□□□ -1.37
SSX3Q99909 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.49□□□□□ -1.37
SSX3Q99909 AC009090.1-201ENST00000562409 358 ntTSL 3 BASIC6.49□□□□□ -1.37
SSX3Q99909 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC6.49□□□□□ -1.37
SSX3Q99909 EIF4A1P9-201ENST00000576035 1207 ntBASIC6.49□□□□□ -1.37
SSX3Q99909 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC6.49□□□□□ -1.37
SSX3Q99909 OR7A18P-201ENST00000600416 277 ntBASIC6.49□□□□□ -1.37
SSX3Q99909 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC6.49□□□□□ -1.37
SSX3Q99909 AL158151.4-201ENST00000600965 507 ntBASIC6.49□□□□□ -1.37
SSX3Q99909 AL049840.6-201ENST00000604583 345 ntBASIC6.49□□□□□ -1.37
SSX3Q99909 AC139795.3-201ENST00000606358 541 ntBASIC6.49□□□□□ -1.37
SSX3Q99909 RN7SL760P-201ENST00000607344 270 ntBASIC6.49□□□□□ -1.37
SSX3Q99909 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC6.49□□□□□ -1.37
SSX3Q99909 AC079801.1-201ENST00000623753 388 ntTSL 3 BASIC6.49□□□□□ -1.37
SSX3Q99909 AC079456.1-201ENST00000624010 480 ntBASIC6.49□□□□□ -1.37
SSX3Q99909 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSX3Q99909 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC6.49□□□□□ -1.37
SSX3Q99909 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX3Q99909 AL139811.2-201ENST00000373465 1630 ntBASIC6.49□□□□□ -1.37
SSX3Q99909 AC104581.5-201ENST00000624171 7141 ntBASIC6.49□□□□□ -1.37
SSX3Q99909 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC6.49□□□□□ -1.37
SSX3Q99909 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX3Q99909 AL355312.2-201ENST00000455607 1541 ntTSL 5 BASIC6.49□□□□□ -1.37
SSX3Q99909 PTER-203ENST00000423462 3212 ntTSL 3 BASIC6.49□□□□□ -1.37
SSX3Q99909 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX3Q99909 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.49□□□□□ -1.37
SSX3Q99909 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
SSX3Q99909 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC6.49□□□□□ -1.37
SSX3Q99909 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC6.49□□□□□ -1.37
SSX3Q99909 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC6.48□□□□□ -1.37
SSX3Q99909 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSX3Q99909 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSX3Q99909 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC6.48□□□□□ -1.37
SSX3Q99909 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.48□□□□□ -1.37
SSX3Q99909 AC093829.1-201ENST00000506662 1618 ntBASIC6.48□□□□□ -1.37
SSX3Q99909 BRD7P6-201ENST00000431406 1860 ntBASIC6.48□□□□□ -1.37
SSX3Q99909 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.48□□□□□ -1.37
SSX3Q99909 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SSX3Q99909 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSX3Q99909 ZNF726-202ENST00000334589 847 ntTSL 3 BASIC6.48□□□□□ -1.37
SSX3Q99909 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSX3Q99909 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SSX3Q99909 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SSX3Q99909 RN7SKP26-201ENST00000410247 293 ntBASIC6.48□□□□□ -1.37
SSX3Q99909 MYB-206ENST00000420123 1051 ntTSL 5 BASIC6.48□□□□□ -1.37
SSX3Q99909 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SSX3Q99909 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSX3Q99909 AL357632.1-201ENST00000426688 643 ntBASIC6.48□□□□□ -1.37
SSX3Q99909 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.48□□□□□ -1.37
SSX3Q99909 SUMO2P8-201ENST00000434672 286 ntBASIC6.48□□□□□ -1.37
SSX3Q99909 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC6.48□□□□□ -1.37
SSX3Q99909 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC6.48□□□□□ -1.37
SSX3Q99909 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.48□□□□□ -1.37
SSX3Q99909 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SSX3Q99909 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC6.48□□□□□ -1.37
SSX3Q99909 RPL4P2-201ENST00000447259 1282 ntBASIC6.48□□□□□ -1.37
SSX3Q99909 AC096543.2-201ENST00000449140 859 ntTSL 3 BASIC6.48□□□□□ -1.37
SSX3Q99909 AL591438.2-201ENST00000452635 691 ntBASIC6.48□□□□□ -1.37
SSX3Q99909 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC6.48□□□□□ -1.37
SSX3Q99909 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC6.48□□□□□ -1.37
SSX3Q99909 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.48□□□□□ -1.37
SSX3Q99909 MLIP-209ENST00000509997 1032 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
SSX3Q99909 AC100849.1-202ENST00000517949 562 ntTSL 3 BASIC6.48□□□□□ -1.37
SSX3Q99909 PIGFP1-201ENST00000519180 653 ntBASIC6.48□□□□□ -1.37
SSX3Q99909 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSX3Q99909 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC6.48□□□□□ -1.37
SSX3Q99909 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC6.48□□□□□ -1.37
SSX3Q99909 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC6.48□□□□□ -1.37
SSX3Q99909 AC136944.5-201ENST00000573021 151 ntBASIC6.48□□□□□ -1.37
SSX3Q99909 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC6.48□□□□□ -1.37
SSX3Q99909 AC007292.3-201ENST00000594776 357 ntTSL 5 BASIC6.48□□□□□ -1.37
SSX3Q99909 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.48□□□□□ -1.37
SSX3Q99909 AP004247.4-201ENST00000608484 942 ntBASIC6.48□□□□□ -1.37
SSX3Q99909 AC243830.3-201ENST00000616810 376 ntBASIC6.48□□□□□ -1.37
SSX3Q99909 AC245028.3-201ENST00000618197 285 ntBASIC6.48□□□□□ -1.37
SSX3Q99909 LINC01125-248ENST00000627284 700 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
SSX3Q99909 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC6.48□□□□□ -1.37
SSX3Q99909 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC6.48□□□□□ -1.37
SSX3Q99909 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SSX3Q99909 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSX3Q99909 LRP4-AS1-201ENST00000502049 1504 ntTSL 2 BASIC6.48□□□□□ -1.37
SSX3Q99909 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSX3Q99909 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSX3Q99909 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC6.48□□□□□ -1.37
SSX3Q99909 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSX3Q99909 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSX3Q99909 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms