Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 NDFIP1P1-201ENST00000543144 525 ntBASIC7.01□□□□□ -1.29
SUMO3P55854 OVCH1-AS1-201ENST00000549411 743 ntTSL 3 BASIC7.01□□□□□ -1.29
SUMO3P55854 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC7.01□□□□□ -1.29
SUMO3P55854 AC013457.1-201ENST00000556770 1011 ntTSL 3 BASIC7.01□□□□□ -1.29
SUMO3P55854 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC7.01□□□□□ -1.29
SUMO3P55854 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC7.01□□□□□ -1.29
SUMO3P55854 AC099508.2-201ENST00000563098 510 ntTSL 3 BASIC7.01□□□□□ -1.29
SUMO3P55854 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC7.01□□□□□ -1.29
SUMO3P55854 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC7.01□□□□□ -1.29
SUMO3P55854 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC7.01□□□□□ -1.29
SUMO3P55854 AL021918.1-201ENST00000603933 236 ntBASIC7.01□□□□□ -1.29
SUMO3P55854 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC7.01□□□□□ -1.29
SUMO3P55854 AC083964.1-201ENST00000607549 630 ntBASIC7.01□□□□□ -1.29
SUMO3P55854 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SUMO3P55854 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC7.01□□□□□ -1.29
SUMO3P55854 AL590410.1-201ENST00000617925 333 ntBASIC7.01□□□□□ -1.29
SUMO3P55854 AL356490.1-201ENST00000623079 479 ntBASIC7.01□□□□□ -1.29
SUMO3P55854 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC7.01□□□□□ -1.29
SUMO3P55854 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SUMO3P55854 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SUMO3P55854 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.01□□□□□ -1.29
SUMO3P55854 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC7.01□□□□□ -1.29
SUMO3P55854 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SUMO3P55854 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.01□□□□□ -1.29
SUMO3P55854 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.01□□□□□ -1.29
SUMO3P55854 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
SUMO3P55854 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SUMO3P55854 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.01□□□□□ -1.29
SUMO3P55854 IL24-207ENST00000611909 1621 ntTSL 3 BASIC7.01□□□□□ -1.29
SUMO3P55854 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SUMO3P55854 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SUMO3P55854 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC7□□□□□ -1.29
SUMO3P55854 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC7□□□□□ -1.29
SUMO3P55854 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7□□□□□ -1.29
SUMO3P55854 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC7□□□□□ -1.29
SUMO3P55854 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
SUMO3P55854 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7□□□□□ -1.29
SUMO3P55854 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC7□□□□□ -1.29
SUMO3P55854 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7□□□□□ -1.29
SUMO3P55854 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
SUMO3P55854 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC7□□□□□ -1.29
SUMO3P55854 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 OR9K2-201ENST00000305377 1122 ntBASIC7□□□□□ -1.29
SUMO3P55854 RNA5SP378-201ENST00000363646 120 ntBASIC7□□□□□ -1.29
SUMO3P55854 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC7□□□□□ -1.29
SUMO3P55854 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC7□□□□□ -1.29
SUMO3P55854 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 MIR555-201ENST00000384987 96 ntBASIC7□□□□□ -1.29
SUMO3P55854 OR4F7P-201ENST00000402444 931 ntBASIC7□□□□□ -1.29
SUMO3P55854 OR4F1P-201ENST00000405102 938 ntBASIC7□□□□□ -1.29
SUMO3P55854 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7□□□□□ -1.29
SUMO3P55854 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC7□□□□□ -1.29
SUMO3P55854 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC7□□□□□ -1.29
SUMO3P55854 OR4F2P-201ENST00000424047 938 ntBASIC7□□□□□ -1.29
SUMO3P55854 PYHIN5P-201ENST00000431627 723 ntBASIC7□□□□□ -1.29
SUMO3P55854 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC7□□□□□ -1.29
SUMO3P55854 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC7□□□□□ -1.29
SUMO3P55854 AL031736.1-201ENST00000449688 618 ntBASIC7□□□□□ -1.29
SUMO3P55854 RPL10P6-201ENST00000457497 318 ntBASIC7□□□□□ -1.29
SUMO3P55854 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC7□□□□□ -1.29
SUMO3P55854 RN7SL124P-201ENST00000498656 285 ntBASIC7□□□□□ -1.29
SUMO3P55854 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC7□□□□□ -1.29
SUMO3P55854 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7□□□□□ -1.29
SUMO3P55854 AC019227.1-201ENST00000526902 510 ntBASIC7□□□□□ -1.29
SUMO3P55854 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC7□□□□□ -1.29
SUMO3P55854 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 AC012414.2-201ENST00000559474 187 ntBASIC7□□□□□ -1.29
SUMO3P55854 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC7□□□□□ -1.29
SUMO3P55854 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC7□□□□□ -1.29
SUMO3P55854 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC7□□□□□ -1.29
SUMO3P55854 VN1R81P-201ENST00000602085 372 ntBASIC7□□□□□ -1.29
SUMO3P55854 AC012488.1-201ENST00000611221 640 ntBASIC7□□□□□ -1.29
SUMO3P55854 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
SUMO3P55854 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC7□□□□□ -1.29
SUMO3P55854 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7□□□□□ -1.29
SUMO3P55854 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
SUMO3P55854 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC7□□□□□ -1.29
SUMO3P55854 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7□□□□□ -1.29
SUMO3P55854 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC7□□□□□ -1.29
SUMO3P55854 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC7□□□□□ -1.29
SUMO3P55854 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC7□□□□□ -1.29
SUMO3P55854 AC145207.5-201ENST00000582866 2682 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms