Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCHD1Q96NR3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTCHD1Q96NR3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PTCHD1Q96NR3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.92■□□□□ 0.62
PTCHD1Q96NR3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCHD1Q96NR3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.92■□□□□ 0.62
PTCHD1Q96NR3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.92■□□□□ 0.62
PTCHD1Q96NR3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.92■□□□□ 0.62
PTCHD1Q96NR3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.92■□□□□ 0.62
PTCHD1Q96NR3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
PTCHD1Q96NR3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCHD1Q96NR3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.92■□□□□ 0.62
PTCHD1Q96NR3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCHD1Q96NR3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PTCHD1Q96NR3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.92■□□□□ 0.62
PTCHD1Q96NR3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCHD1Q96NR3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD1Q96NR3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.91■□□□□ 0.62
PTCHD1Q96NR3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD1Q96NR3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD1Q96NR3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PTCHD1Q96NR3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.91■□□□□ 0.62
PTCHD1Q96NR3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD1Q96NR3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.91■□□□□ 0.62
PTCHD1Q96NR3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PTCHD1Q96NR3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD1Q96NR3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD1Q96NR3 AL390719.1-204ENST00000412397 1219 ntBASIC18.91■□□□□ 0.62
PTCHD1Q96NR3 FAM201B-201ENST00000458407 597 ntBASIC18.91■□□□□ 0.62
PTCHD1Q96NR3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.91■□□□□ 0.62
PTCHD1Q96NR3 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.91■□□□□ 0.62
PTCHD1Q96NR3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD1Q96NR3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD1Q96NR3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD1Q96NR3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PTCHD1Q96NR3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PTCHD1Q96NR3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD1Q96NR3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD1Q96NR3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTCHD1Q96NR3 AC092667.1-201ENST00000434301 2586 ntBASIC18.9■□□□□ 0.62
PTCHD1Q96NR3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCHD1Q96NR3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PTCHD1Q96NR3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCHD1Q96NR3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCHD1Q96NR3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTCHD1Q96NR3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTCHD1Q96NR3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCHD1Q96NR3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.9■□□□□ 0.62
PTCHD1Q96NR3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.9■□□□□ 0.62
PTCHD1Q96NR3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.9■□□□□ 0.62
PTCHD1Q96NR3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.9■□□□□ 0.62
PTCHD1Q96NR3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCHD1Q96NR3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTCHD1Q96NR3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCHD1Q96NR3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.9■□□□□ 0.62
PTCHD1Q96NR3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.9■□□□□ 0.62
PTCHD1Q96NR3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.9■□□□□ 0.62
PTCHD1Q96NR3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCHD1Q96NR3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PTCHD1Q96NR3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.9■□□□□ 0.62
PTCHD1Q96NR3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
PTCHD1Q96NR3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PTCHD1Q96NR3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PTCHD1Q96NR3 DPP3P2-201ENST00000416030 1696 ntBASIC18.89■□□□□ 0.61
PTCHD1Q96NR3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTCHD1Q96NR3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTCHD1Q96NR3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTCHD1Q96NR3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PTCHD1Q96NR3 ESRRAP1-201ENST00000400596 1257 ntBASIC18.89■□□□□ 0.61
PTCHD1Q96NR3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTCHD1Q96NR3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
PTCHD1Q96NR3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTCHD1Q96NR3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PTCHD1Q96NR3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
PTCHD1Q96NR3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PTCHD1Q96NR3 AIRN-201ENST00000601203 4374 ntBASIC18.89■□□□□ 0.61
PTCHD1Q96NR3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTCHD1Q96NR3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTCHD1Q96NR3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PTCHD1Q96NR3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCHD1Q96NR3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCHD1Q96NR3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCHD1Q96NR3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCHD1Q96NR3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCHD1Q96NR3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PTCHD1Q96NR3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.88■□□□□ 0.61
PTCHD1Q96NR3 POU5F1P3-201ENST00000428824 1078 ntBASIC18.88■□□□□ 0.61
PTCHD1Q96NR3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PTCHD1Q96NR3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.88■□□□□ 0.61
PTCHD1Q96NR3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.88■□□□□ 0.61
PTCHD1Q96NR3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCHD1Q96NR3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.88■□□□□ 0.61
PTCHD1Q96NR3 SOX15-203ENST00000570788 1093 ntBASIC18.88■□□□□ 0.61
PTCHD1Q96NR3 AC005829.2-201ENST00000571422 1056 ntBASIC18.88■□□□□ 0.61
PTCHD1Q96NR3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTCHD1Q96NR3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.88■□□□□ 0.61
PTCHD1Q96NR3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PTCHD1Q96NR3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCHD1Q96NR3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.88■□□□□ 0.61
PTCHD1Q96NR3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms