Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GCN1Q92616 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.75■□□□□ 0.43
GCN1Q92616 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
GCN1Q92616 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GCN1Q92616 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.75■□□□□ 0.43
GCN1Q92616 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GCN1Q92616 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GCN1Q92616 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.74■□□□□ 0.43
GCN1Q92616 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
GCN1Q92616 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.74■□□□□ 0.43
GCN1Q92616 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
GCN1Q92616 SLC25A1P2-201ENST00000430693 912 ntBASIC17.74■□□□□ 0.43
GCN1Q92616 AC140113.3-201ENST00000605663 199 ntBASIC17.74■□□□□ 0.43
GCN1Q92616 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
GCN1Q92616 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GCN1Q92616 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GCN1Q92616 AL590627.1-203ENST00000421194 1026 ntBASIC17.74■□□□□ 0.43
GCN1Q92616 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.74■□□□□ 0.43
GCN1Q92616 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.74■□□□□ 0.43
GCN1Q92616 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
GCN1Q92616 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.74■□□□□ 0.43
GCN1Q92616 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.74■□□□□ 0.43
GCN1Q92616 AC092329.2-201ENST00000598402 547 ntBASIC17.74■□□□□ 0.43
GCN1Q92616 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GCN1Q92616 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
GCN1Q92616 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GCN1Q92616 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GCN1Q92616 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GCN1Q92616 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GCN1Q92616 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.73■□□□□ 0.43
GCN1Q92616 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.73■□□□□ 0.43
GCN1Q92616 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GCN1Q92616 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.73■□□□□ 0.43
GCN1Q92616 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GCN1Q92616 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.73■□□□□ 0.43
GCN1Q92616 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
GCN1Q92616 AP003733.4-201ENST00000623785 1697 ntBASIC17.73■□□□□ 0.43
GCN1Q92616 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GCN1Q92616 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
GCN1Q92616 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
GCN1Q92616 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.73■□□□□ 0.43
GCN1Q92616 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GCN1Q92616 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.73■□□□□ 0.43
GCN1Q92616 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.72■□□□□ 0.43
GCN1Q92616 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.72■□□□□ 0.43
GCN1Q92616 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GCN1Q92616 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
GCN1Q92616 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.72■□□□□ 0.43
GCN1Q92616 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
GCN1Q92616 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
GCN1Q92616 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.72■□□□□ 0.43
GCN1Q92616 AP001160.2-201ENST00000596071 487 ntBASIC17.72■□□□□ 0.43
GCN1Q92616 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GCN1Q92616 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.72■□□□□ 0.43
GCN1Q92616 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GCN1Q92616 KRT18P1-202ENST00000452408 1331 ntBASIC17.72■□□□□ 0.43
GCN1Q92616 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GCN1Q92616 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.72■□□□□ 0.43
GCN1Q92616 AC055717.3-201ENST00000622967 595 ntBASIC17.72■□□□□ 0.43
GCN1Q92616 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.72■□□□□ 0.43
GCN1Q92616 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GCN1Q92616 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.71■□□□□ 0.43
GCN1Q92616 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GCN1Q92616 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.71■□□□□ 0.43
GCN1Q92616 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GCN1Q92616 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GCN1Q92616 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
GCN1Q92616 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GCN1Q92616 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GCN1Q92616 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GCN1Q92616 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GCN1Q92616 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.71■□□□□ 0.43
GCN1Q92616 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
GCN1Q92616 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GCN1Q92616 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.71■□□□□ 0.43
GCN1Q92616 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.71■□□□□ 0.43
GCN1Q92616 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.71■□□□□ 0.43
GCN1Q92616 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.71■□□□□ 0.43
GCN1Q92616 AC116562.4-202ENST00000641738 218 ntBASIC17.71■□□□□ 0.43
GCN1Q92616 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
GCN1Q92616 AC092053.2-201ENST00000640557 1818 ntBASIC17.71■□□□□ 0.42
GCN1Q92616 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GCN1Q92616 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GCN1Q92616 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
GCN1Q92616 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GCN1Q92616 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GCN1Q92616 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GCN1Q92616 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GCN1Q92616 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.7■□□□□ 0.42
GCN1Q92616 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.7■□□□□ 0.42
GCN1Q92616 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GCN1Q92616 AL023973.1-201ENST00000624619 620 ntBASIC17.7■□□□□ 0.42
GCN1Q92616 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GCN1Q92616 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GCN1Q92616 AC092338.2-201ENST00000568827 1415 ntBASIC17.7■□□□□ 0.42
GCN1Q92616 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GCN1Q92616 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GCN1Q92616 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GCN1Q92616 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GCN1Q92616 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms