Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 MIR5787-201ENST00000611784 55 ntBASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 AC125437.2-201ENST00000625180 2167 ntBASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 AL158211.5-201ENST00000623583 2518 ntBASIC16.85■□□□□ 0.29
RTN4IP1Q8WWV3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN4IP1Q8WWV3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN4IP1Q8WWV3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTN4IP1Q8WWV3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.84■□□□□ 0.29
RTN4IP1Q8WWV3 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.84■□□□□ 0.29
RTN4IP1Q8WWV3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN4IP1Q8WWV3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.84■□□□□ 0.29
RTN4IP1Q8WWV3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN4IP1Q8WWV3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.84■□□□□ 0.29
RTN4IP1Q8WWV3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN4IP1Q8WWV3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN4IP1Q8WWV3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RTN4IP1Q8WWV3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.84■□□□□ 0.29
RTN4IP1Q8WWV3 AC138932.1-201ENST00000534164 6830 ntBASIC16.84■□□□□ 0.29
RTN4IP1Q8WWV3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN4IP1Q8WWV3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.84■□□□□ 0.29
RTN4IP1Q8WWV3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.84■□□□□ 0.29
RTN4IP1Q8WWV3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.84■□□□□ 0.29
RTN4IP1Q8WWV3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN4IP1Q8WWV3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RTN4IP1Q8WWV3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTN4IP1Q8WWV3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RTN4IP1Q8WWV3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RTN4IP1Q8WWV3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
RTN4IP1Q8WWV3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN4IP1Q8WWV3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN4IP1Q8WWV3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN4IP1Q8WWV3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN4IP1Q8WWV3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RTN4IP1Q8WWV3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN4IP1Q8WWV3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RTN4IP1Q8WWV3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN4IP1Q8WWV3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN4IP1Q8WWV3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RTN4IP1Q8WWV3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RTN4IP1Q8WWV3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.83■□□□□ 0.28
RTN4IP1Q8WWV3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.83■□□□□ 0.28
RTN4IP1Q8WWV3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN4IP1Q8WWV3 SLC7A5P1-201ENST00000568957 537 ntBASIC16.83■□□□□ 0.28
RTN4IP1Q8WWV3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.83■□□□□ 0.28
RTN4IP1Q8WWV3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RTN4IP1Q8WWV3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.83■□□□□ 0.28
RTN4IP1Q8WWV3 UBE2DNL-204ENST00000602536 740 ntBASIC16.83■□□□□ 0.28
RTN4IP1Q8WWV3 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.83■□□□□ 0.28
RTN4IP1Q8WWV3 RARRES2P11-201ENST00000635158 484 ntBASIC16.83■□□□□ 0.28
RTN4IP1Q8WWV3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN4IP1Q8WWV3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTN4IP1Q8WWV3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 AC098818.2-201ENST00000564925 2320 ntBASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTN4IP1Q8WWV3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.81■□□□□ 0.28
RTN4IP1Q8WWV3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms