Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
NKX2-3Q8TAU0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NKX2-3Q8TAU0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.87■■□□□ 1.41
NKX2-3Q8TAU0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.87■■□□□ 1.41
NKX2-3Q8TAU0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NKX2-3Q8TAU0 AC060766.5-201ENST00000590539 871 ntBASIC23.87■■□□□ 1.41
NKX2-3Q8TAU0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.87■■□□□ 1.41
NKX2-3Q8TAU0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
NKX2-3Q8TAU0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NKX2-3Q8TAU0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.87■■□□□ 1.41
NKX2-3Q8TAU0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
NKX2-3Q8TAU0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.87■■□□□ 1.41
NKX2-3Q8TAU0 AL391422.3-201ENST00000603791 2761 ntBASIC23.87■■□□□ 1.41
NKX2-3Q8TAU0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NKX2-3Q8TAU0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC23.87■■□□□ 1.41
NKX2-3Q8TAU0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
NKX2-3Q8TAU0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NKX2-3Q8TAU0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NKX2-3Q8TAU0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NKX2-3Q8TAU0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NKX2-3Q8TAU0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NKX2-3Q8TAU0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.86■■□□□ 1.41
NKX2-3Q8TAU0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.86■■□□□ 1.41
NKX2-3Q8TAU0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
NKX2-3Q8TAU0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
NKX2-3Q8TAU0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NKX2-3Q8TAU0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NKX2-3Q8TAU0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.85■■□□□ 1.41
NKX2-3Q8TAU0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.85■■□□□ 1.41
NKX2-3Q8TAU0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NKX2-3Q8TAU0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.85■■□□□ 1.41
NKX2-3Q8TAU0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
NKX2-3Q8TAU0 AC020907.5-201ENST00000624372 1936 ntBASIC23.85■■□□□ 1.41
NKX2-3Q8TAU0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
NKX2-3Q8TAU0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NKX2-3Q8TAU0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NKX2-3Q8TAU0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.85■■□□□ 1.41
NKX2-3Q8TAU0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
NKX2-3Q8TAU0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC23.85■■□□□ 1.41
NKX2-3Q8TAU0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC23.85■■□□□ 1.41
NKX2-3Q8TAU0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.85■■□□□ 1.41
NKX2-3Q8TAU0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NKX2-3Q8TAU0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NKX2-3Q8TAU0 HLA-B-256ENST00000639848 1089 ntBASIC23.85■■□□□ 1.41
NKX2-3Q8TAU0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NKX2-3Q8TAU0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.85■■□□□ 1.41
NKX2-3Q8TAU0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.85■■□□□ 1.41
NKX2-3Q8TAU0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.85■■□□□ 1.41
NKX2-3Q8TAU0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
NKX2-3Q8TAU0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.84■■□□□ 1.41
NKX2-3Q8TAU0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC23.84■■□□□ 1.41
NKX2-3Q8TAU0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.84■■□□□ 1.41
NKX2-3Q8TAU0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC23.84■■□□□ 1.41
NKX2-3Q8TAU0 ABHD17AP6-201ENST00000458502 1044 ntBASIC23.84■■□□□ 1.41
NKX2-3Q8TAU0 BX088651.1-201ENST00000540551 451 ntBASIC23.84■■□□□ 1.41
NKX2-3Q8TAU0 RN7SL471P-201ENST00000580476 299 ntBASIC23.84■■□□□ 1.41
NKX2-3Q8TAU0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NKX2-3Q8TAU0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NKX2-3Q8TAU0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NKX2-3Q8TAU0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC23.84■■□□□ 1.41
NKX2-3Q8TAU0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
NKX2-3Q8TAU0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
NKX2-3Q8TAU0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.83■■□□□ 1.41
NKX2-3Q8TAU0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NKX2-3Q8TAU0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.83■■□□□ 1.41
NKX2-3Q8TAU0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NKX2-3Q8TAU0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.83■■□□□ 1.41
NKX2-3Q8TAU0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
NKX2-3Q8TAU0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NKX2-3Q8TAU0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC23.83■■□□□ 1.41
NKX2-3Q8TAU0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.83■■□□□ 1.41
NKX2-3Q8TAU0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NKX2-3Q8TAU0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NKX2-3Q8TAU0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NKX2-3Q8TAU0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC23.83■■□□□ 1.4
NKX2-3Q8TAU0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NKX2-3Q8TAU0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NKX2-3Q8TAU0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.82■■□□□ 1.4
NKX2-3Q8TAU0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.82■■□□□ 1.4
NKX2-3Q8TAU0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
NKX2-3Q8TAU0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.82■■□□□ 1.4
NKX2-3Q8TAU0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
NKX2-3Q8TAU0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NKX2-3Q8TAU0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NKX2-3Q8TAU0 DPP3P2-201ENST00000416030 1696 ntBASIC23.82■■□□□ 1.4
NKX2-3Q8TAU0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NKX2-3Q8TAU0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.82■■□□□ 1.4
NKX2-3Q8TAU0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
NKX2-3Q8TAU0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NKX2-3Q8TAU0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NKX2-3Q8TAU0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NKX2-3Q8TAU0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NKX2-3Q8TAU0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NKX2-3Q8TAU0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.81■■□□□ 1.4
NKX2-3Q8TAU0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC23.81■■□□□ 1.4
NKX2-3Q8TAU0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
NKX2-3Q8TAU0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
NKX2-3Q8TAU0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.81■■□□□ 1.4
NKX2-3Q8TAU0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NKX2-3Q8TAU0 AL162377.1-201ENST00000618844 1793 ntBASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms