Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm5P62322 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.55□□□□□ -0.08
Lsm5P62322 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm5P62322 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm5P62322 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Lsm5P62322 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm5P62322 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Lsm5P62322 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm5P62322 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm5P62322 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.55□□□□□ -0.08
Lsm5P62322 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm5P62322 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Lsm5P62322 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Lsm5P62322 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm5P62322 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Lsm5P62322 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm5P62322 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm5P62322 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm5P62322 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm5P62322 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm5P62322 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.54□□□□□ -0.08
Lsm5P62322 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm5P62322 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm5P62322 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.54□□□□□ -0.08
Lsm5P62322 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.54□□□□□ -0.08
Lsm5P62322 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm5P62322 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.54□□□□□ -0.08
Lsm5P62322 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm5P62322 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm5P62322 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm5P62322 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm5P62322 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm5P62322 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm5P62322 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.53□□□□□ -0.08
Lsm5P62322 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm5P62322 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm5P62322 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Lsm5P62322 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm5P62322 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm5P62322 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm5P62322 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm5P62322 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm5P62322 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Lsm5P62322 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm5P62322 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm5P62322 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm5P62322 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm5P62322 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm5P62322 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.53□□□□□ -0.08
Lsm5P62322 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Lsm5P62322 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Lsm5P62322 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm5P62322 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.53□□□□□ -0.08
Lsm5P62322 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm5P62322 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm5P62322 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm5P62322 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm5P62322 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm5P62322 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm5P62322 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm5P62322 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Lsm5P62322 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm5P62322 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Lsm5P62322 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm5P62322 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm5P62322 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Lsm5P62322 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm5P62322 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm5P62322 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm5P62322 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Lsm5P62322 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm5P62322 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm5P62322 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm5P62322 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm5P62322 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm5P62322 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm5P62322 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm5P62322 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm5P62322 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm5P62322 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.51□□□□□ -0.09
Lsm5P62322 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm5P62322 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm5P62322 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.51□□□□□ -0.09
Lsm5P62322 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.51□□□□□ -0.09
Lsm5P62322 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.51□□□□□ -0.09
Lsm5P62322 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm5P62322 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Lsm5P62322 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm5P62322 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm5P62322 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm5P62322 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm5P62322 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm5P62322 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm5P62322 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm5P62322 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.5□□□□□ -0.09
Lsm5P62322 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Lsm5P62322 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Lsm5P62322 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm5P62322 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm5P62322 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms