Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
HADHBP55084 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HADHBP55084 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HADHBP55084 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HADHBP55084 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HADHBP55084 AC005332.7-201ENST00000614046 2005 ntBASIC21.04■□□□□ 0.96
HADHBP55084 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HADHBP55084 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HADHBP55084 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
HADHBP55084 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.04■□□□□ 0.96
HADHBP55084 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HADHBP55084 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.04■□□□□ 0.96
HADHBP55084 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HADHBP55084 AC087623.3-201ENST00000607047 1098 ntBASIC21.04■□□□□ 0.96
HADHBP55084 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HADHBP55084 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.04■□□□□ 0.96
HADHBP55084 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HADHBP55084 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HADHBP55084 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HADHBP55084 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HADHBP55084 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.03■□□□□ 0.96
HADHBP55084 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HADHBP55084 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.03■□□□□ 0.96
HADHBP55084 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HADHBP55084 KRT18P5-201ENST00000436075 1291 ntBASIC21.03■□□□□ 0.96
HADHBP55084 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.03■□□□□ 0.96
HADHBP55084 AC137761.2-201ENST00000561729 223 ntBASIC21.03■□□□□ 0.96
HADHBP55084 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.03■□□□□ 0.96
HADHBP55084 AC145350.3-201ENST00000569033 163 ntBASIC21.03■□□□□ 0.96
HADHBP55084 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.03■□□□□ 0.96
HADHBP55084 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.03■□□□□ 0.96
HADHBP55084 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.03■□□□□ 0.96
HADHBP55084 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HADHBP55084 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.03■□□□□ 0.96
HADHBP55084 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.03■□□□□ 0.96
HADHBP55084 KRT8P20-201ENST00000423953 1409 ntBASIC21.03■□□□□ 0.96
HADHBP55084 KRT16P6-202ENST00000425692 1426 ntBASIC21.03■□□□□ 0.96
HADHBP55084 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HADHBP55084 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HADHBP55084 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
HADHBP55084 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HADHBP55084 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.02■□□□□ 0.96
HADHBP55084 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HADHBP55084 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HADHBP55084 KRT18P68-201ENST00000392293 1000 ntBASIC21.02■□□□□ 0.96
HADHBP55084 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.02■□□□□ 0.96
HADHBP55084 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.02■□□□□ 0.96
HADHBP55084 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.02■□□□□ 0.96
HADHBP55084 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
HADHBP55084 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.02■□□□□ 0.96
HADHBP55084 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.02■□□□□ 0.96
HADHBP55084 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.02■□□□□ 0.96
HADHBP55084 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HADHBP55084 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.02■□□□□ 0.95
HADHBP55084 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
HADHBP55084 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
HADHBP55084 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
HADHBP55084 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
HADHBP55084 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HADHBP55084 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HADHBP55084 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HADHBP55084 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.01■□□□□ 0.95
HADHBP55084 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HADHBP55084 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.01■□□□□ 0.95
HADHBP55084 AC006015.1-201ENST00000429970 570 ntBASIC21.01■□□□□ 0.95
HADHBP55084 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.01■□□□□ 0.95
HADHBP55084 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.01■□□□□ 0.95
HADHBP55084 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HADHBP55084 AC093484.2-201ENST00000580996 2166 ntBASIC21.01■□□□□ 0.95
HADHBP55084 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.01■□□□□ 0.95
HADHBP55084 AC018445.3-201ENST00000624177 1945 ntBASIC21.01■□□□□ 0.95
HADHBP55084 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.01■□□□□ 0.95
HADHBP55084 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
HADHBP55084 AP001271.2-201ENST00000624018 1556 ntBASIC21.01■□□□□ 0.95
HADHBP55084 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HADHBP55084 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HADHBP55084 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
HADHBP55084 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HADHBP55084 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HADHBP55084 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HADHBP55084 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.01■□□□□ 0.95
HADHBP55084 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
HADHBP55084 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21■□□□□ 0.95
HADHBP55084 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HADHBP55084 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HADHBP55084 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21■□□□□ 0.95
HADHBP55084 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21■□□□□ 0.95
HADHBP55084 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
HADHBP55084 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HADHBP55084 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
HADHBP55084 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HADHBP55084 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21■□□□□ 0.95
HADHBP55084 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21■□□□□ 0.95
HADHBP55084 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
HADHBP55084 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21■□□□□ 0.95
HADHBP55084 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21■□□□□ 0.95
HADHBP55084 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HADHBP55084 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HADHBP55084 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
HADHBP55084 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms