Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ITGA8P53708 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ITGA8P53708 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGA8P53708 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGA8P53708 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ITGA8P53708 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ITGA8P53708 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ITGA8P53708 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ITGA8P53708 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGA8P53708 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
ITGA8P53708 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGA8P53708 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.57■□□□□ 0.88
ITGA8P53708 CDV3P1-201ENST00000471403 739 ntBASIC20.57■□□□□ 0.88
ITGA8P53708 AC093484.2-201ENST00000580996 2166 ntBASIC20.57■□□□□ 0.88
ITGA8P53708 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.57■□□□□ 0.88
ITGA8P53708 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGA8P53708 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ITGA8P53708 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITGA8P53708 AP000974.1-201ENST00000623909 2387 ntBASIC20.57■□□□□ 0.88
ITGA8P53708 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGA8P53708 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ITGA8P53708 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGA8P53708 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGA8P53708 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ITGA8P53708 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGA8P53708 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ITGA8P53708 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ITGA8P53708 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.56■□□□□ 0.88
ITGA8P53708 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ITGA8P53708 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.56■□□□□ 0.88
ITGA8P53708 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.56■□□□□ 0.88
ITGA8P53708 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.56■□□□□ 0.88
ITGA8P53708 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.56■□□□□ 0.88
ITGA8P53708 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.56■□□□□ 0.88
ITGA8P53708 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
ITGA8P53708 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGA8P53708 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ITGA8P53708 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGA8P53708 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ITGA8P53708 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ITGA8P53708 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITGA8P53708 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.56■□□□□ 0.88
ITGA8P53708 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ITGA8P53708 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA8P53708 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA8P53708 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.55■□□□□ 0.88
ITGA8P53708 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.55■□□□□ 0.88
ITGA8P53708 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.55■□□□□ 0.88
ITGA8P53708 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA8P53708 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.55■□□□□ 0.88
ITGA8P53708 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA8P53708 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA8P53708 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA8P53708 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA8P53708 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ITGA8P53708 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA8P53708 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.55■□□□□ 0.88
ITGA8P53708 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA8P53708 KRT18P14-201ENST00000534205 1250 ntBASIC20.55■□□□□ 0.88
ITGA8P53708 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA8P53708 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA8P53708 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.55■□□□□ 0.88
ITGA8P53708 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.55■□□□□ 0.88
ITGA8P53708 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ITGA8P53708 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA8P53708 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA8P53708 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.55■□□□□ 0.88
ITGA8P53708 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA8P53708 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ITGA8P53708 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITGA8P53708 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITGA8P53708 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ITGA8P53708 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITGA8P53708 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.54■□□□□ 0.88
ITGA8P53708 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITGA8P53708 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.54■□□□□ 0.88
ITGA8P53708 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ITGA8P53708 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ITGA8P53708 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
ITGA8P53708 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.54■□□□□ 0.88
ITGA8P53708 YBX1P1-201ENST00000445822 960 ntBASIC20.54■□□□□ 0.88
ITGA8P53708 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.54■□□□□ 0.88
ITGA8P53708 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.54■□□□□ 0.88
ITGA8P53708 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ITGA8P53708 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.54■□□□□ 0.88
ITGA8P53708 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.54■□□□□ 0.88
ITGA8P53708 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITGA8P53708 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITGA8P53708 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ITGA8P53708 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ITGA8P53708 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITGA8P53708 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ITGA8P53708 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ITGA8P53708 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
ITGA8P53708 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.53■□□□□ 0.88
ITGA8P53708 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITGA8P53708 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
ITGA8P53708 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.53■□□□□ 0.88
ITGA8P53708 AL356652.1-201ENST00000615962 565 ntBASIC20.53■□□□□ 0.88
ITGA8P53708 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms