Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Gm27275-201ENSMUST00000184318 272 ntBASIC16.28■□□□□ 0.2
IghmP01872 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IghmP01872 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IghmP01872 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
IghmP01872 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
IghmP01872 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
IghmP01872 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IghmP01872 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IghmP01872 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IghmP01872 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IghmP01872 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
IghmP01872 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IghmP01872 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
IghmP01872 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
IghmP01872 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.27■□□□□ 0.2
IghmP01872 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.27■□□□□ 0.2
IghmP01872 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
IghmP01872 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
IghmP01872 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IghmP01872 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
IghmP01872 Gm18025-201ENSMUST00000221733 862 ntBASIC16.27■□□□□ 0.2
IghmP01872 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
IghmP01872 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.27■□□□□ 0.2
IghmP01872 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
IghmP01872 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
IghmP01872 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
IghmP01872 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
IghmP01872 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
IghmP01872 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
IghmP01872 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
IghmP01872 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
IghmP01872 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
IghmP01872 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IghmP01872 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IghmP01872 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IghmP01872 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IghmP01872 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.26■□□□□ 0.19
IghmP01872 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IghmP01872 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
IghmP01872 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.26■□□□□ 0.19
IghmP01872 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IghmP01872 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IghmP01872 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IghmP01872 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.26■□□□□ 0.19
IghmP01872 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IghmP01872 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IghmP01872 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IghmP01872 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IghmP01872 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IghmP01872 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IghmP01872 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IghmP01872 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
IghmP01872 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IghmP01872 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IghmP01872 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IghmP01872 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
IghmP01872 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IghmP01872 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IghmP01872 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.25■□□□□ 0.19
IghmP01872 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IghmP01872 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
IghmP01872 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IghmP01872 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.25■□□□□ 0.19
IghmP01872 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.25■□□□□ 0.19
IghmP01872 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.25■□□□□ 0.19
IghmP01872 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IghmP01872 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IghmP01872 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IghmP01872 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.25■□□□□ 0.19
IghmP01872 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.25■□□□□ 0.19
IghmP01872 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
IghmP01872 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IghmP01872 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IghmP01872 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IghmP01872 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
IghmP01872 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IghmP01872 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.24■□□□□ 0.19
IghmP01872 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IghmP01872 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
IghmP01872 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
IghmP01872 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.24■□□□□ 0.19
IghmP01872 Gm42545-201ENSMUST00000202755 922 ntBASIC16.24■□□□□ 0.19
IghmP01872 Gm20049-201ENSMUST00000219950 730 ntBASIC16.24■□□□□ 0.19
IghmP01872 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IghmP01872 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IghmP01872 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
IghmP01872 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IghmP01872 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.24■□□□□ 0.19
IghmP01872 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IghmP01872 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
IghmP01872 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IghmP01872 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IghmP01872 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
IghmP01872 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IghmP01872 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IghmP01872 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IghmP01872 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IghmP01872 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
IghmP01872 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IghmP01872 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms