Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3aO08759 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.8■□□□□ 0.6
Ube3aO08759 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3aO08759 Gm10418-201ENSMUST00000100943 576 ntBASIC18.8■□□□□ 0.6
Ube3aO08759 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.8■□□□□ 0.6
Ube3aO08759 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3aO08759 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3aO08759 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3aO08759 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3aO08759 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3aO08759 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Ube3aO08759 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ube3aO08759 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3aO08759 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ube3aO08759 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3aO08759 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3aO08759 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ube3aO08759 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ube3aO08759 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3aO08759 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3aO08759 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3aO08759 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3aO08759 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3aO08759 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3aO08759 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.79■□□□□ 0.6
Ube3aO08759 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3aO08759 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.79■□□□□ 0.6
Ube3aO08759 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ube3aO08759 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3aO08759 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3aO08759 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3aO08759 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3aO08759 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3aO08759 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3aO08759 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.78■□□□□ 0.6
Ube3aO08759 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.78■□□□□ 0.6
Ube3aO08759 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3aO08759 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3aO08759 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3aO08759 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3aO08759 Gm7514-201ENSMUST00000209475 934 ntBASIC18.78■□□□□ 0.6
Ube3aO08759 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.78■□□□□ 0.6
Ube3aO08759 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3aO08759 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3aO08759 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3aO08759 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3aO08759 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3aO08759 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3aO08759 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3aO08759 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3aO08759 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Ube3aO08759 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.77■□□□□ 0.6
Ube3aO08759 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.77■□□□□ 0.6
Ube3aO08759 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3aO08759 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3aO08759 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3aO08759 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3aO08759 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3aO08759 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ube3aO08759 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Ube3aO08759 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ube3aO08759 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ube3aO08759 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.76■□□□□ 0.59
Ube3aO08759 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ube3aO08759 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Ube3aO08759 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3aO08759 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Ube3aO08759 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3aO08759 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.76■□□□□ 0.59
Ube3aO08759 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3aO08759 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.76■□□□□ 0.59
Ube3aO08759 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3aO08759 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3aO08759 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ube3aO08759 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3aO08759 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3aO08759 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3aO08759 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3aO08759 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ube3aO08759 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3aO08759 Gm38285-201ENSMUST00000192928 922 ntBASIC18.75■□□□□ 0.59
Ube3aO08759 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3aO08759 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3aO08759 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3aO08759 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ube3aO08759 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3aO08759 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.75■□□□□ 0.59
Ube3aO08759 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3aO08759 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ube3aO08759 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3aO08759 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3aO08759 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3aO08759 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ube3aO08759 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.74■□□□□ 0.59
Ube3aO08759 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ube3aO08759 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ube3aO08759 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ube3aO08759 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3aO08759 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ube3aO08759 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms