Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL158211.2-201ENST00000607282 395 ntBASIC7.09□□□□□ -1.27
SNX18Q96RF0 AC007620.3-201ENST00000608131 497 ntBASIC7.09□□□□□ -1.27
SNX18Q96RF0 AP000240.1-201ENST00000609910 452 ntBASIC7.09□□□□□ -1.27
SNX18Q96RF0 AC099654.4-201ENST00000614168 1059 ntBASIC7.09□□□□□ -1.27
SNX18Q96RF0 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SNX18Q96RF0 AL354696.1-201ENST00000614652 497 ntBASIC7.09□□□□□ -1.27
SNX18Q96RF0 SLC20A1P2-201ENST00000618036 966 ntBASIC7.09□□□□□ -1.27
SNX18Q96RF0 AL118508.4-201ENST00000624142 1176 ntBASIC7.09□□□□□ -1.27
SNX18Q96RF0 ZCCHC17-209ENST00000627541 1158 ntTSL 5 BASIC7.09□□□□□ -1.27
SNX18Q96RF0 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
SNX18Q96RF0 OSBPL6-202ENST00000315022 2999 ntTSL 2 BASIC7.09□□□□□ -1.27
SNX18Q96RF0 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.09□□□□□ -1.27
SNX18Q96RF0 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.09□□□□□ -1.27
SNX18Q96RF0 ZNF334-206ENST00000625284 2495 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
SNX18Q96RF0 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SNX18Q96RF0 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.09□□□□□ -1.27
SNX18Q96RF0 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC7.09□□□□□ -1.27
SNX18Q96RF0 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SNX18Q96RF0 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
SNX18Q96RF0 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.09□□□□□ -1.27
SNX18Q96RF0 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
SNX18Q96RF0 EEF1A1P2-201ENST00000553854 1447 ntBASIC7.09□□□□□ -1.28
SNX18Q96RF0 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
SNX18Q96RF0 BRD7P6-201ENST00000431406 1860 ntBASIC7.09□□□□□ -1.28
SNX18Q96RF0 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.09□□□□□ -1.28
SNX18Q96RF0 PSG5-201ENST00000342951 1626 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
SNX18Q96RF0 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
SNX18Q96RF0 ZC3H14-203ENST00000318308 1384 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SNX18Q96RF0 CADPS-220ENST00000613879 1804 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SNX18Q96RF0 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
SNX18Q96RF0 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SNX18Q96RF0 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
SNX18Q96RF0 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SNX18Q96RF0 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SNX18Q96RF0 MS4A2-201ENST00000278888 1152 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SNX18Q96RF0 RNA5SP263-201ENST00000363376 128 ntBASIC7.08□□□□□ -1.28
SNX18Q96RF0 RNU4-59P-201ENST00000364447 116 ntBASIC7.08□□□□□ -1.28
SNX18Q96RF0 RNU1-11P-201ENST00000383975 164 ntBASIC7.08□□□□□ -1.28
SNX18Q96RF0 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SNX18Q96RF0 AL080285.1-201ENST00000404225 984 ntBASIC7.08□□□□□ -1.28
SNX18Q96RF0 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 AC008063.1-201ENST00000418335 640 ntTSL 3 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 AC097523.2-201ENST00000435551 652 ntBASIC7.08□□□□□ -1.28
SNX18Q96RF0 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 AL590648.1-201ENST00000456479 460 ntBASIC7.08□□□□□ -1.28
SNX18Q96RF0 OR52A4P-202ENST00000481634 799 ntBASIC7.08□□□□□ -1.28
SNX18Q96RF0 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 OR7E129P-201ENST00000504655 968 ntBASIC7.08□□□□□ -1.28
SNX18Q96RF0 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 SNORA70.23-201ENST00000517218 151 ntBASIC7.08□□□□□ -1.28
SNX18Q96RF0 AC087360.1-201ENST00000518788 616 ntBASIC7.08□□□□□ -1.28
SNX18Q96RF0 AP000445.1-201ENST00000526692 741 ntBASIC7.08□□□□□ -1.28
SNX18Q96RF0 DNM1P33-201ENST00000565222 270 ntBASIC7.08□□□□□ -1.28
SNX18Q96RF0 ZNF585B-207ENST00000586320 403 ntTSL 3 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 AC243960.3-201ENST00000599316 580 ntTSL 4 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 AC073529.1-202ENST00000608576 1080 ntTSL 5 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 AL136967.1-201ENST00000625120 441 ntBASIC7.08□□□□□ -1.28
SNX18Q96RF0 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 LINC00598-212ENST00000637124 905 ntTSL 5 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 AC025287.4-201ENST00000640173 1240 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.08□□□□□ -1.28
SNX18Q96RF0 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 FBN2-203ENST00000507835 1884 ntTSL 5 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 AL117339.4-201ENST00000608335 7063 ntBASIC7.08□□□□□ -1.28
SNX18Q96RF0 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SNX18Q96RF0 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SNX18Q96RF0 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SNX18Q96RF0 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.08□□□□□ -1.28
SNX18Q96RF0 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SNX18Q96RF0 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SNX18Q96RF0 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SNX18Q96RF0 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SNX18Q96RF0 AC005614.1-201ENST00000598952 3653 ntBASIC7.07□□□□□ -1.28
SNX18Q96RF0 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SNX18Q96RF0 SALL1P1-201ENST00000438101 3837 ntBASIC7.07□□□□□ -1.28
SNX18Q96RF0 AL512604.2-201ENST00000426946 1314 ntTSL 5 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 AC034111.1-201ENST00000562143 3770 ntBASIC7.07□□□□□ -1.28
SNX18Q96RF0 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SNX18Q96RF0 AC103760.1-201ENST00000521326 1486 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SNX18Q96RF0 CU633906.2-205ENST00000624847 1468 ntTSL 5 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
SNX18Q96RF0 OR4D9-201ENST00000329328 945 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
SNX18Q96RF0 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms