Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PKD1L2-202ENST00000337114 3427 ntTSL 5 BASIC9.65□□□□□ -0.86
ALDH1A1P00352 TSPAN31-206ENST00000547992 3434 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
ALDH1A1P00352 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
ALDH1A1P00352 CACNB4-231ENST00000636721 1542 ntTSL 5 BASIC9.65□□□□□ -0.86
ALDH1A1P00352 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC9.65□□□□□ -0.86
ALDH1A1P00352 MAGEB4-201ENST00000378982 2142 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
ALDH1A1P00352 MIR4290HG-201ENST00000426593 2720 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
ALDH1A1P00352 ECM2-201ENST00000344604 3253 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
ALDH1A1P00352 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
ALDH1A1P00352 NOP2-218ENST00000545200 2751 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
ALDH1A1P00352 SUN1-210ENST00000425407 3868 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 TUBA1A-202ENST00000301071 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALDH1A1P00352 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
ALDH1A1P00352 TEX10-204ENST00000535814 3006 ntTSL 2 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALDH1A1P00352 ANKRD13C-202ENST00000370944 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALDH1A1P00352 RHPN2-201ENST00000254260 3500 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALDH1A1P00352 CPEB1-AS1-202ENST00000618020 2994 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 MAPK10-255ENST00000641020 2412 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 AC092451.3-201ENST00000625067 1343 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALDH1A1P00352 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
ALDH1A1P00352 NPAP1P4-201ENST00000443325 3310 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALDH1A1P00352 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
ALDH1A1P00352 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALDH1A1P00352 Y_RNA.559-201ENST00000384686 107 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 ZNF603P-201ENST00000405613 487 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 AL137784.1-201ENST00000407121 745 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 RNU4-72P-201ENST00000410754 173 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 AGBL5-IT1-201ENST00000411862 339 ntTSL 3 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 AL008626.1-201ENST00000412357 775 ntTSL 2 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 RPL12P10-201ENST00000413498 498 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 TGFB2-AS1-201ENST00000414452 557 ntTSL 3 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 EEF1A1P31-201ENST00000415978 1131 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 AC090044.1-201ENST00000423193 497 ntTSL 2 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 PTP4A1P7-201ENST00000423476 514 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 AC245047.1-201ENST00000433276 873 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 AL353803.3-201ENST00000444641 335 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 RPL36AP55-201ENST00000454114 305 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 HNRNPCP7-201ENST00000456056 905 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 CTLA4-204ENST00000472206 277 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
ALDH1A1P00352 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 AC109464.2-201ENST00000510242 943 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 AC022695.2-201ENST00000518042 768 ntTSL 3 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 OR5G4P-201ENST00000525251 760 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 REG4-204ENST00000530654 612 ntTSL 5 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 OR7E128P-201ENST00000532736 1024 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 SLC25A51P2-201ENST00000535708 889 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 CCDC58P3-201ENST00000590792 430 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 AF131215.7-201ENST00000602443 707 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 AC016394.1-201ENST00000608444 833 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 AC009159.3-201ENST00000615570 804 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 AC024595.1-201ENST00000623088 387 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 TTC33-205ENST00000636106 2252 ntTSL 5 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 MEIS2-211ENST00000559085 2538 ntTSL 2 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 ZNF750-201ENST00000269394 3713 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALDH1A1P00352 NDST2-202ENST00000309979 3749 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALDH1A1P00352 AC104825.2-201ENST00000505448 3249 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 BRAFP1-201ENST00000445336 2703 ntBASIC9.64□□□□□ -0.87
ALDH1A1P00352 CA5B-204ENST00000454127 2205 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 AP000977.1-201ENST00000501964 2908 ntTSL 2 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 CD46-202ENST00000322918 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALDH1A1P00352 CLRN1-201ENST00000295911 1444 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
ALDH1A1P00352 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC9.64□□□□□ -0.87
ALDH1A1P00352 SLC12A3-203ENST00000563236 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
ALDH1A1P00352 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
ALDH1A1P00352 PRNT-203ENST00000423718 2096 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALDH1A1P00352 GID8-201ENST00000266069 4397 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALDH1A1P00352 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 TRO-208ENST00000420798 3613 ntTSL 2 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 ACBD5-204ENST00000375905 3848 ntAPPRIS P3 TSL 2 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 POP4-202ENST00000585603 3385 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALDH1A1P00352 AL135818.1-202ENST00000554096 1740 ntTSL 3 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 BTN2A3P-204ENST00000466808 2559 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
ALDH1A1P00352 EMC3-201ENST00000245046 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALDH1A1P00352 LOXHD1-211ENST00000579038 3632 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
ALDH1A1P00352 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms