Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
RIMBP3Q9UFD9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC32.4■■■□□ 2.78
RIMBP3Q9UFD9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC32.4■■■□□ 2.78
RIMBP3Q9UFD9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
RIMBP3Q9UFD9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
RIMBP3Q9UFD9 ABCB10P4-201ENST00000566803 2184 ntBASIC32.4■■■□□ 2.78
RIMBP3Q9UFD9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC32.4■■■□□ 2.78
RIMBP3Q9UFD9 AC023632.3-201ENST00000521633 145 ntBASIC32.4■■■□□ 2.78
RIMBP3Q9UFD9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC32.4■■■□□ 2.78
RIMBP3Q9UFD9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC32.39■■■□□ 2.78
RIMBP3Q9UFD9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC32.39■■■□□ 2.78
RIMBP3Q9UFD9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
RIMBP3Q9UFD9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC32.39■■■□□ 2.78
RIMBP3Q9UFD9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC32.39■■■□□ 2.78
RIMBP3Q9UFD9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
RIMBP3Q9UFD9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
RIMBP3Q9UFD9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
RIMBP3Q9UFD9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC32.39■■■□□ 2.78
RIMBP3Q9UFD9 AC112907.2-201ENST00000448639 330 ntBASIC32.39■■■□□ 2.78
RIMBP3Q9UFD9 AC104692.2-201ENST00000603054 253 ntBASIC32.39■■■□□ 2.78
RIMBP3Q9UFD9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC32.39■■■□□ 2.78
RIMBP3Q9UFD9 AC116562.4-202ENST00000641738 218 ntBASIC32.39■■■□□ 2.78
RIMBP3Q9UFD9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
RIMBP3Q9UFD9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
RIMBP3Q9UFD9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC32.38■■■□□ 2.77
RIMBP3Q9UFD9 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
RIMBP3Q9UFD9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
RIMBP3Q9UFD9 KRT18P13-201ENST00000400056 1290 ntBASIC32.38■■■□□ 2.77
RIMBP3Q9UFD9 AC092183.1-201ENST00000469884 875 ntBASIC32.38■■■□□ 2.77
RIMBP3Q9UFD9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC32.38■■■□□ 2.77
RIMBP3Q9UFD9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC32.38■■■□□ 2.77
RIMBP3Q9UFD9 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
RIMBP3Q9UFD9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC32.38■■■□□ 2.77
RIMBP3Q9UFD9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC32.37■■■□□ 2.77
RIMBP3Q9UFD9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
RIMBP3Q9UFD9 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
RIMBP3Q9UFD9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC32.37■■■□□ 2.77
RIMBP3Q9UFD9 AC079781.3-201ENST00000449110 356 ntBASIC32.37■■■□□ 2.77
RIMBP3Q9UFD9 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC32.37■■■□□ 2.77
RIMBP3Q9UFD9 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC32.37■■■□□ 2.77
RIMBP3Q9UFD9 SLC25A6P4-201ENST00000586535 553 ntBASIC32.37■■■□□ 2.77
RIMBP3Q9UFD9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
RIMBP3Q9UFD9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC32.37■■■□□ 2.77
RIMBP3Q9UFD9 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC32.37■■■□□ 2.77
RIMBP3Q9UFD9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC32.37■■■□□ 2.77
RIMBP3Q9UFD9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
RIMBP3Q9UFD9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC32.37■■■□□ 2.77
RIMBP3Q9UFD9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
RIMBP3Q9UFD9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC32.37■■■□□ 2.77
RIMBP3Q9UFD9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
RIMBP3Q9UFD9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC32.37■■■□□ 2.77
RIMBP3Q9UFD9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC32.37■■■□□ 2.77
RIMBP3Q9UFD9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
RIMBP3Q9UFD9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC32.36■■■□□ 2.77
RIMBP3Q9UFD9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC32.36■■■□□ 2.77
RIMBP3Q9UFD9 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC32.36■■■□□ 2.77
RIMBP3Q9UFD9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
RIMBP3Q9UFD9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC32.35■■■□□ 2.77
RIMBP3Q9UFD9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
RIMBP3Q9UFD9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC32.35■■■□□ 2.77
RIMBP3Q9UFD9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
RIMBP3Q9UFD9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC32.35■■■□□ 2.77
RIMBP3Q9UFD9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
RIMBP3Q9UFD9 CCR12P-201ENST00000446203 998 ntBASIC32.35■■■□□ 2.77
RIMBP3Q9UFD9 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
RIMBP3Q9UFD9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
RIMBP3Q9UFD9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
RIMBP3Q9UFD9 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC32.34■■■□□ 2.77
RIMBP3Q9UFD9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
RIMBP3Q9UFD9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
RIMBP3Q9UFD9 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC32.34■■■□□ 2.77
RIMBP3Q9UFD9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC32.34■■■□□ 2.77
RIMBP3Q9UFD9 PRSS44-201ENST00000515154 1146 ntBASIC32.34■■■□□ 2.77
RIMBP3Q9UFD9 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC32.34■■■□□ 2.77
RIMBP3Q9UFD9 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
RIMBP3Q9UFD9 AC139530.1-201ENST00000575312 1977 ntBASIC32.34■■■□□ 2.77
RIMBP3Q9UFD9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
RIMBP3Q9UFD9 AC068473.5-201ENST00000616428 2072 ntBASIC32.34■■■□□ 2.77
RIMBP3Q9UFD9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
RIMBP3Q9UFD9 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
RIMBP3Q9UFD9 ETFA-216ENST00000560726 942 ntTSL 3 BASIC32.33■■■□□ 2.77
RIMBP3Q9UFD9 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC32.33■■■□□ 2.77
RIMBP3Q9UFD9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC32.33■■■□□ 2.77
RIMBP3Q9UFD9 DFFB-212ENST00000625756 649 ntTSL 5 BASIC32.33■■■□□ 2.77
RIMBP3Q9UFD9 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC32.33■■■□□ 2.77
RIMBP3Q9UFD9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC32.33■■■□□ 2.77
RIMBP3Q9UFD9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC32.33■■■□□ 2.77
RIMBP3Q9UFD9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC32.33■■■□□ 2.77
RIMBP3Q9UFD9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
RIMBP3Q9UFD9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC32.33■■■□□ 2.77
RIMBP3Q9UFD9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
RIMBP3Q9UFD9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC32.33■■■□□ 2.77
RIMBP3Q9UFD9 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
RIMBP3Q9UFD9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
RIMBP3Q9UFD9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC32.33■■■□□ 2.77
RIMBP3Q9UFD9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC32.33■■■□□ 2.77
RIMBP3Q9UFD9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC32.33■■■□□ 2.77
RIMBP3Q9UFD9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC32.32■■■□□ 2.76
RIMBP3Q9UFD9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
RIMBP3Q9UFD9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms