Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Gm14859-201ENSMUST00000117752 357 ntBASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Gm22697-201ENSMUST00000175194 63 ntBASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Gm6728-201ENSMUST00000178117 1065 ntBASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Gm19324-201ENSMUST00000213229 1169 ntBASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Sec61bQ9CQS8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
Sec61bQ9CQS8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Gm27389-201ENSMUST00000183622 195 ntBASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Sec61bQ9CQS8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms