Protein–RNA interactions for Protein: Q00723

PRP38, Pre-mRNA-splicing factor 38, yeastyeast

Predicted RBP Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP38Q00723 tH(GUG)HtH(GUG)H 72 nt1.29□□□□□ -2.2
PRP38Q00723 tH(GUG)KtH(GUG)K 72 nt1.29□□□□□ -2.2
PRP38Q00723 tH(GUG)MtH(GUG)M 72 nt1.29□□□□□ -2.2
PRP38Q00723 snR51snR51 107 nt1.29□□□□□ -2.2
PRP38Q00723 MAD1YGL086W 2250 nt1.29□□□□□ -2.2
PRP38Q00723 tW(UCA)QtW(UCA)Q 74 nt1.28□□□□□ -2.2
PRP38Q00723 YNL058CYNL058C 951 nt1.28□□□□□ -2.2
PRP38Q00723 RPB10YOR210W 213 nt1.28□□□□□ -2.2
PRP38Q00723 BIL1YOR304C-A 231 nt1.28□□□□□ -2.2
PRP38Q00723 MVP1YMR004W 1536 nt1.28□□□□□ -2.2
PRP38Q00723 SGO1YOR073W 1773 nt1.28□□□□□ -2.2
PRP38Q00723 YGR130CYGR130C 2451 nt1.28□□□□□ -2.2
PRP38Q00723 PIG1YLR273C 1947 nt1.27□□□□□ -2.21
PRP38Q00723 AHC1YOR023C 1701 nt1.27□□□□□ -2.21
PRP38Q00723 YGR109W-BYGR109W-B 4644 nt1.27□□□□□ -2.21
PRP38Q00723 YJL022WYJL022W 309 nt1.27□□□□□ -2.21
PRP38Q00723 YPR016W-AYPR016W-A 261 nt1.27□□□□□ -2.21
PRP38Q00723 YPR197CYPR197C 564 nt1.27□□□□□ -2.21
PRP38Q00723 SAS3YBL052C 2496 nt1.27□□□□□ -2.21
PRP38Q00723 SMC4YLR086W 4257 nt1.26□□□□□ -2.21
PRP38Q00723 EMC5YIL027C 426 nt1.26□□□□□ -2.21
PRP38Q00723 AI5_ALPHAQ0070 1893 nt1.26□□□□□ -2.21
PRP38Q00723 SEC5YDR166C 2916 nt1.26□□□□□ -2.21
PRP38Q00723 RAD50YNL250W 3939 nt1.25□□□□□ -2.21
PRP38Q00723 ENV11YGR071C 2583 nt1.25□□□□□ -2.21
PRP38Q00723 RSM22YKL155C 1887 nt1.25□□□□□ -2.21
PRP38Q00723 snR72snR72 98 nt1.25□□□□□ -2.21
PRP38Q00723 CSN9YDR179C 489 nt1.25□□□□□ -2.21
PRP38Q00723 YDR182W-AYDR182W-A 204 nt1.25□□□□□ -2.21
PRP38Q00723 COF1YLL050C 432 nt1.25□□□□□ -2.21
PRP38Q00723 ALK1YGL021W 2283 nt1.24□□□□□ -2.21
PRP38Q00723 RPS20YHL015W 366 nt1.24□□□□□ -2.21
PRP38Q00723 YJL015CYJL015C 285 nt1.24□□□□□ -2.21
PRP38Q00723 YJL135WYJL135W 318 nt1.24□□□□□ -2.21
PRP38Q00723 RPL40BYKR094C 387 nt1.24□□□□□ -2.21
PRP38Q00723 APL2YKL135C 2181 nt1.24□□□□□ -2.21
PRP38Q00723 UFD2YDL190C 2886 nt1.23□□□□□ -2.21
PRP38Q00723 NCA2YPR155C 1851 nt1.23□□□□□ -2.21
PRP38Q00723 SDH2YLL041C 801 nt1.23□□□□□ -2.21
PRP38Q00723 RPL38YLR325C 237 nt1.23□□□□□ -2.21
PRP38Q00723 YML007C-AYML007C-A 111 nt1.23□□□□□ -2.21
PRP38Q00723 INP2YMR163C 2118 nt1.23□□□□□ -2.21
PRP38Q00723 YOR199WYOR199W 330 nt1.23□□□□□ -2.21
PRP38Q00723 YNL284C-BYNL284C-B 5268 nt1.23□□□□□ -2.21
PRP38Q00723 YGL217CYGL217C 342 nt1.22□□□□□ -2.21
PRP38Q00723 YMR175W-AYMR175W-A 195 nt1.22□□□□□ -2.21
PRP38Q00723 YMR242W-AYMR242W-A 90 nt1.22□□□□□ -2.21
PRP38Q00723 YOR376WYOR376W 369 nt1.22□□□□□ -2.21
PRP38Q00723 ZIP2YGL249W 2115 nt1.22□□□□□ -2.21
PRP38Q00723 RIM20YOR275C 1986 nt1.21□□□□□ -2.22
PRP38Q00723 PBY1YBR094W 2262 nt1.21□□□□□ -2.22
PRP38Q00723 CDC36YDL165W 576 nt1.21□□□□□ -2.22
PRP38Q00723 RPL33BYOR234C 324 nt1.21□□□□□ -2.22
PRP38Q00723 TIM18YOR297C 579 nt1.21□□□□□ -2.22
PRP38Q00723 YPR002C-AYPR002C-A 198 nt1.21□□□□□ -2.22
PRP38Q00723 IML1YJR138W 4755 nt1.21□□□□□ -2.22
PRP38Q00723 RAD9YDR217C 3930 nt1.21□□□□□ -2.22
PRP38Q00723 NOC3YLR002C 1992 nt1.21□□□□□ -2.22
PRP38Q00723 SLX4YLR135W 2247 nt1.2□□□□□ -2.22
PRP38Q00723 KAP122YGL016W 3246 nt1.2□□□□□ -2.22
PRP38Q00723 YDR426CYDR426C 378 nt1.2□□□□□ -2.22
PRP38Q00723 VPS55YJR044C 423 nt1.2□□□□□ -2.22
PRP38Q00723 YOL160WYOL160W 342 nt1.2□□□□□ -2.22
PRP38Q00723 MSN5YDR335W 3675 nt1.2□□□□□ -2.22
PRP38Q00723 RPL35AYDL191W 363 nt1.19□□□□□ -2.22
PRP38Q00723 tV(UAC)BtV(UAC)B 74 nt1.19□□□□□ -2.22
PRP38Q00723 tV(UAC)DtV(UAC)D 74 nt1.19□□□□□ -2.22
PRP38Q00723 YAF9YNL107W 681 nt1.19□□□□□ -2.22
PRP38Q00723 SPO75YLL005C 2607 nt1.19□□□□□ -2.22
PRP38Q00723 EST2YLR318W 2655 nt1.18□□□□□ -2.22
PRP38Q00723 NPC2YDL046W 522 nt1.18□□□□□ -2.22
PRP38Q00723 YDL240C-AYDL240C-A 138 nt1.18□□□□□ -2.22
PRP38Q00723 YIL020C-AYIL020C-A 339 nt1.18□□□□□ -2.22
PRP38Q00723 PCC1YKR095W-A 267 nt1.18□□□□□ -2.22
PRP38Q00723 YOR108C-AYOR108C-A 210 nt1.18□□□□□ -2.22
PRP38Q00723 YPL038W-AYPL038W-A 192 nt1.18□□□□□ -2.22
PRP38Q00723 VPS54YDR027C 2670 nt1.18□□□□□ -2.22
PRP38Q00723 SCW11YGL028C 1629 nt1.18□□□□□ -2.22
PRP38Q00723 PIP2YOR363C 2991 nt1.17□□□□□ -2.22
PRP38Q00723 YDR169C-AYDR169C-A 150 nt1.17□□□□□ -2.22
PRP38Q00723 YDR524W-CYDR524W-C 90 nt1.17□□□□□ -2.22
PRP38Q00723 HTB2YBL002W 396 nt1.17□□□□□ -2.22
PRP38Q00723 YLL054CYLL054C 2532 nt1.16□□□□□ -2.22
PRP38Q00723 YHR007C-AYHR007C-A 216 nt1.16□□□□□ -2.22
PRP38Q00723 RRT15YLR162W-A 189 nt1.16□□□□□ -2.22
PRP38Q00723 snR14snR14 160 nt1.16□□□□□ -2.22
PRP38Q00723 NUT1YGL151W 3399 nt1.16□□□□□ -2.22
PRP38Q00723 AZF1YOR113W 2745 nt1.15□□□□□ -2.23
PRP38Q00723 RAD34YDR314C 2079 nt1.14□□□□□ -2.23
PRP38Q00723 YDR102CYDR102C 333 nt1.14□□□□□ -2.23
PRP38Q00723 YMR290W-AYMR290W-A 348 nt1.14□□□□□ -2.23
PRP38Q00723 YPL225WYPL225W 441 nt1.14□□□□□ -2.23
PRP38Q00723 MDS3YGL197W 4464 nt1.14□□□□□ -2.23
PRP38Q00723 TRM732YMR259C 4263 nt1.14□□□□□ -2.23
PRP38Q00723 SLI15YBR156C 2097 nt1.13□□□□□ -2.23
PRP38Q00723 YDL211CYDL211C 1119 nt1.13□□□□□ -2.23
PRP38Q00723 YDR048CYDR048C 315 nt1.13□□□□□ -2.23
PRP38Q00723 MAM33YIL070C 801 nt1.13□□□□□ -2.23
PRP38Q00723 YAR029WYAR029W 225 nt1.13□□□□□ -2.23
PRP38Q00723 YSY6YBR162W-A 198 nt1.13□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 50.2 ms