Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC073111.5-205ENST00000641717 521 ntBASIC19.13■□□□□ 0.65
RAE1P78406 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAE1P78406 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAE1P78406 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAE1P78406 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAE1P78406 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAE1P78406 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAE1P78406 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.13■□□□□ 0.65
RAE1P78406 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAE1P78406 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAE1P78406 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
RAE1P78406 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAE1P78406 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAE1P78406 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAE1P78406 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.12■□□□□ 0.65
RAE1P78406 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAE1P78406 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAE1P78406 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAE1P78406 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.12■□□□□ 0.65
RAE1P78406 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.12■□□□□ 0.65
RAE1P78406 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAE1P78406 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.12■□□□□ 0.65
RAE1P78406 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAE1P78406 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAE1P78406 CDCA4P2-201ENST00000441182 718 ntBASIC19.12■□□□□ 0.65
RAE1P78406 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
RAE1P78406 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.12■□□□□ 0.65
RAE1P78406 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.12■□□□□ 0.65
RAE1P78406 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RAE1P78406 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.12■□□□□ 0.65
RAE1P78406 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.12■□□□□ 0.65
RAE1P78406 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAE1P78406 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.12■□□□□ 0.65
RAE1P78406 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
RAE1P78406 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAE1P78406 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAE1P78406 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.11■□□□□ 0.65
RAE1P78406 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.11■□□□□ 0.65
RAE1P78406 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RAE1P78406 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.11■□□□□ 0.65
RAE1P78406 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RAE1P78406 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAE1P78406 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAE1P78406 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.11■□□□□ 0.65
RAE1P78406 AL512625.2-201ENST00000417533 625 ntBASIC19.11■□□□□ 0.65
RAE1P78406 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAE1P78406 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.11■□□□□ 0.65
RAE1P78406 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RAE1P78406 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.11■□□□□ 0.65
RAE1P78406 AL050303.2-201ENST00000619798 666 ntBASIC19.11■□□□□ 0.65
RAE1P78406 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAE1P78406 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAE1P78406 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAE1P78406 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAE1P78406 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.11■□□□□ 0.65
RAE1P78406 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.11■□□□□ 0.65
RAE1P78406 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAE1P78406 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAE1P78406 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAE1P78406 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAE1P78406 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAE1P78406 KRT17P1-201ENST00000399211 1546 ntBASIC19.1■□□□□ 0.65
RAE1P78406 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAE1P78406 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAE1P78406 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.1■□□□□ 0.65
RAE1P78406 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.1■□□□□ 0.65
RAE1P78406 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RAE1P78406 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAE1P78406 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAE1P78406 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAE1P78406 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAE1P78406 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAE1P78406 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.1■□□□□ 0.65
RAE1P78406 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.1■□□□□ 0.65
RAE1P78406 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.1■□□□□ 0.65
RAE1P78406 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RAE1P78406 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAE1P78406 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAE1P78406 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RAE1P78406 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAE1P78406 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RAE1P78406 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAE1P78406 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAE1P78406 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.09■□□□□ 0.65
RAE1P78406 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAE1P78406 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.09■□□□□ 0.65
RAE1P78406 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAE1P78406 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.09■□□□□ 0.65
RAE1P78406 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.09■□□□□ 0.65
RAE1P78406 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAE1P78406 RAP2CP1-201ENST00000605103 478 ntBASIC19.09■□□□□ 0.65
RAE1P78406 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAE1P78406 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.09■□□□□ 0.65
RAE1P78406 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.09■□□□□ 0.65
RAE1P78406 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RAE1P78406 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAE1P78406 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.09■□□□□ 0.65
RAE1P78406 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAE1P78406 KRT8P17-201ENST00000453110 1448 ntBASIC19.08■□□□□ 0.65
RAE1P78406 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms