Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tpm1P58771 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.47■□□□□ 0.71
Tpm1P58771 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tpm1P58771 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tpm1P58771 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tpm1P58771 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tpm1P58771 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm1P58771 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm1P58771 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.46■□□□□ 0.71
Tpm1P58771 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm1P58771 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm1P58771 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm1P58771 Idnk-204ENSMUST00000226010 1898 ntBASIC19.46■□□□□ 0.71
Tpm1P58771 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.46■□□□□ 0.71
Tpm1P58771 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Tpm1P58771 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm1P58771 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm1P58771 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm1P58771 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm1P58771 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm1P58771 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm1P58771 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm1P58771 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.45■□□□□ 0.7
Tpm1P58771 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm1P58771 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm1P58771 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm1P58771 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm1P58771 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Tpm1P58771 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm1P58771 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm1P58771 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm1P58771 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Tpm1P58771 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm1P58771 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.45■□□□□ 0.7
Tpm1P58771 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm1P58771 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm1P58771 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm1P58771 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm1P58771 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm1P58771 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm1P58771 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.45■□□□□ 0.7
Tpm1P58771 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm1P58771 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm1P58771 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm1P58771 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm1P58771 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.44■□□□□ 0.7
Tpm1P58771 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm1P58771 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm1P58771 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Tpm1P58771 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.44■□□□□ 0.7
Tpm1P58771 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm1P58771 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm1P58771 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm1P58771 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
Tpm1P58771 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Tpm1P58771 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm1P58771 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm1P58771 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Tpm1P58771 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Tpm1P58771 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm1P58771 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm1P58771 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Tpm1P58771 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm1P58771 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.43■□□□□ 0.7
Tpm1P58771 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.43■□□□□ 0.7
Tpm1P58771 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Tpm1P58771 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm1P58771 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm1P58771 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC19.43■□□□□ 0.7
Tpm1P58771 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm1P58771 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm1P58771 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.43■□□□□ 0.7
Tpm1P58771 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm1P58771 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm1P58771 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Tpm1P58771 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm1P58771 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
Tpm1P58771 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.42■□□□□ 0.7
Tpm1P58771 Gm42778-201ENSMUST00000199644 553 ntBASIC19.42■□□□□ 0.7
Tpm1P58771 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.42■□□□□ 0.7
Tpm1P58771 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.42■□□□□ 0.7
Tpm1P58771 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm1P58771 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm1P58771 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Tpm1P58771 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm1P58771 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm1P58771 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm1P58771 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Tpm1P58771 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm1P58771 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.41■□□□□ 0.7
Tpm1P58771 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm1P58771 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm1P58771 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm1P58771 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm1P58771 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm1P58771 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.41■□□□□ 0.7
Tpm1P58771 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.41■□□□□ 0.7
Tpm1P58771 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm1P58771 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Tpm1P58771 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms