Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB28P51157 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB28P51157 HLA-G-202ENST00000376815 851 ntBASIC19.45■□□□□ 0.7
RAB28P51157 HLA-G-203ENST00000376818 1127 ntBASIC19.45■□□□□ 0.7
RAB28P51157 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB28P51157 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB28P51157 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.45■□□□□ 0.7
RAB28P51157 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.45■□□□□ 0.7
RAB28P51157 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.45■□□□□ 0.7
RAB28P51157 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.45■□□□□ 0.7
RAB28P51157 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
RAB28P51157 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
RAB28P51157 AL031963.3-201ENST00000606441 850 ntBASIC19.45■□□□□ 0.7
RAB28P51157 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB28P51157 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.45■□□□□ 0.7
RAB28P51157 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB28P51157 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB28P51157 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
RAB28P51157 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB28P51157 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.44■□□□□ 0.7
RAB28P51157 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB28P51157 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.44■□□□□ 0.7
RAB28P51157 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RAB28P51157 SMG8-203ENST00000578922 2178 ntBASIC19.44■□□□□ 0.7
RAB28P51157 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB28P51157 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB28P51157 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RAB28P51157 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB28P51157 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB28P51157 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB28P51157 KRT8P17-201ENST00000453110 1448 ntBASIC19.43■□□□□ 0.7
RAB28P51157 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RAB28P51157 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB28P51157 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB28P51157 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB28P51157 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.43■□□□□ 0.7
RAB28P51157 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
RAB28P51157 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB28P51157 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.43■□□□□ 0.7
RAB28P51157 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.43■□□□□ 0.7
RAB28P51157 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.43■□□□□ 0.7
RAB28P51157 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB28P51157 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RAB28P51157 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB28P51157 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB28P51157 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB28P51157 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB28P51157 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB28P51157 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.43■□□□□ 0.7
RAB28P51157 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB28P51157 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB28P51157 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB28P51157 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB28P51157 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB28P51157 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB28P51157 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB28P51157 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB28P51157 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RAB28P51157 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB28P51157 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RAB28P51157 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.42■□□□□ 0.7
RAB28P51157 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB28P51157 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
RAB28P51157 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.42■□□□□ 0.7
RAB28P51157 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB28P51157 SOX15-203ENST00000570788 1093 ntBASIC19.42■□□□□ 0.7
RAB28P51157 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RAB28P51157 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB28P51157 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RAB28P51157 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB28P51157 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB28P51157 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
RAB28P51157 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB28P51157 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB28P51157 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB28P51157 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB28P51157 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB28P51157 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RAB28P51157 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB28P51157 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB28P51157 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB28P51157 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.41■□□□□ 0.7
RAB28P51157 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB28P51157 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB28P51157 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB28P51157 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB28P51157 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB28P51157 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB28P51157 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB28P51157 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB28P51157 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RAB28P51157 UNC93B4-201ENST00000505679 747 ntBASIC19.41■□□□□ 0.7
RAB28P51157 MIR4651-201ENST00000582622 73 ntBASIC19.41■□□□□ 0.7
RAB28P51157 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB28P51157 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
RAB28P51157 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB28P51157 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB28P51157 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB28P51157 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB28P51157 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms