Protein–RNA interactions for Protein: P42582

Nkx2-5, Homeobox protein Nkx-2.5, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-5P42582 Gm13401-201ENSMUST00000117074 291 ntBASIC18.5■□□□□ 0.55
Nkx2-5P42582 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Nkx2-5P42582 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.5■□□□□ 0.55
Nkx2-5P42582 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.5■□□□□ 0.55
Nkx2-5P42582 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.5■□□□□ 0.55
Nkx2-5P42582 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Nkx2-5P42582 Gm10033-202ENSMUST00000211874 928 ntBASIC18.5■□□□□ 0.55
Nkx2-5P42582 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-5P42582 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-5P42582 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-5P42582 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Nkx2-5P42582 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-5P42582 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-5P42582 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-5P42582 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Nkx2-5P42582 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-5P42582 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-5P42582 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-5P42582 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.49■□□□□ 0.55
Nkx2-5P42582 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-5P42582 Dancr-204ENSMUST00000132389 2347 ntBASIC18.49■□□□□ 0.55
Nkx2-5P42582 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Nkx2-5P42582 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-5P42582 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-5P42582 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Nkx2-5P42582 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-5P42582 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Nkx2-5P42582 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-5P42582 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-5P42582 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Nkx2-5P42582 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-5P42582 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-5P42582 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Nkx2-5P42582 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-5P42582 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
Nkx2-5P42582 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-5P42582 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-5P42582 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Nkx2-5P42582 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Nkx2-5P42582 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-5P42582 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-5P42582 Gm10493-201ENSMUST00000097270 612 ntBASIC18.48■□□□□ 0.55
Nkx2-5P42582 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-5P42582 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-5P42582 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.48■□□□□ 0.55
Nkx2-5P42582 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-5P42582 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.48■□□□□ 0.55
Nkx2-5P42582 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-5P42582 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-5P42582 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-5P42582 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-5P42582 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-5P42582 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-5P42582 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.47■□□□□ 0.55
Nkx2-5P42582 Mir2861-201ENSMUST00000175539 82 ntBASIC18.47■□□□□ 0.55
Nkx2-5P42582 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
Nkx2-5P42582 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-5P42582 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-5P42582 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-5P42582 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Nkx2-5P42582 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-5P42582 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-5P42582 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-5P42582 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Nkx2-5P42582 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-5P42582 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-5P42582 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-5P42582 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-5P42582 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-5P42582 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-5P42582 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-5P42582 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.46■□□□□ 0.55
Nkx2-5P42582 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.46■□□□□ 0.55
Nkx2-5P42582 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-5P42582 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-5P42582 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-5P42582 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Nkx2-5P42582 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-5P42582 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Nkx2-5P42582 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Nkx2-5P42582 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.45■□□□□ 0.54
Nkx2-5P42582 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.45■□□□□ 0.54
Nkx2-5P42582 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-5P42582 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-5P42582 Gm7291-201ENSMUST00000199147 382 ntBASIC18.45■□□□□ 0.54
Nkx2-5P42582 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.45■□□□□ 0.54
Nkx2-5P42582 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-5P42582 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-5P42582 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-5P42582 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-5P42582 Zfp783-201ENSMUST00000095946 670 ntBASIC18.45■□□□□ 0.54
Nkx2-5P42582 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-5P42582 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-5P42582 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-5P42582 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Nkx2-5P42582 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.45■□□□□ 0.54
Nkx2-5P42582 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-5P42582 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx2-5P42582 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx2-5P42582 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms