Protein–RNA interactions for Protein: P39000

SHC1, Protein SHC1, yeastyeast

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHC1P39000 AI5_ALPHAQ0070 1893 nt1.01□□□□□ -2.25
SHC1P39000 YLL054CYLL054C 2532 nt1□□□□□ -2.25
SHC1P39000 SPT21YMR179W 2277 nt1□□□□□ -2.25
SHC1P39000 NOC3YLR002C 1992 nt1□□□□□ -2.25
SHC1P39000 YDR114CYDR114C 303 nt1□□□□□ -2.25
SHC1P39000 YEL050W-AYEL050W-A 192 nt0.99□□□□□ -2.25
SHC1P39000 UTP8YGR128C 2142 nt0.99□□□□□ -2.25
SHC1P39000 YML108WYML108W 318 nt0.99□□□□□ -2.25
SHC1P39000 CDC33YOL139C 642 nt0.99□□□□□ -2.25
SHC1P39000 AIM29YKR074W 468 nt0.98□□□□□ -2.25
SHC1P39000 SDH2YLL041C 801 nt0.98□□□□□ -2.25
SHC1P39000 IFH1YLR223C 3258 nt0.98□□□□□ -2.25
SHC1P39000 YLL032CYLL032C 2478 nt0.97□□□□□ -2.25
SHC1P39000 SMC1YFL008W 3678 nt0.97□□□□□ -2.25
SHC1P39000 YGR045CYGR045C 363 nt0.97□□□□□ -2.25
SHC1P39000 YIL066W-AYIL066W-A 444 nt0.97□□□□□ -2.25
SHC1P39000 YBR076C-AYBR076C-A 267 nt0.97□□□□□ -2.25
SHC1P39000 RFX1YLR176C 2436 nt0.96□□□□□ -2.26
SHC1P39000 YGR290WYGR290W 444 nt0.96□□□□□ -2.26
SHC1P39000 RPL16AYIL133C 600 nt0.96□□□□□ -2.26
SHC1P39000 MRPL31YKL138C 396 nt0.96□□□□□ -2.26
SHC1P39000 SCW11YGL028C 1629 nt0.96□□□□□ -2.26
SHC1P39000 MPT5YGL178W 2580 nt0.96□□□□□ -2.26
SHC1P39000 SWI6YLR182W 2412 nt0.95□□□□□ -2.26
SHC1P39000 YER076W-AYER076W-A 348 nt0.95□□□□□ -2.26
SHC1P39000 YAL016C-BYAL016C-B 186 nt0.95□□□□□ -2.26
SHC1P39000 SLD3YGL113W 2007 nt0.94□□□□□ -2.26
SHC1P39000 CYC7YEL039C 342 nt0.94□□□□□ -2.26
SHC1P39000 YER087C-AYER087C-A 552 nt0.94□□□□□ -2.26
SHC1P39000 FYV7YLR068W 456 nt0.94□□□□□ -2.26
SHC1P39000 YBR221W-AYBR221W-A 105 nt0.94□□□□□ -2.26
SHC1P39000 SET3YKR029C 2256 nt0.94□□□□□ -2.26
SHC1P39000 YEL030C-AYEL030C-A 315 nt0.93□□□□□ -2.26
SHC1P39000 YMR141W-AYMR141W-A 225 nt0.93□□□□□ -2.26
SHC1P39000 YNL122CYNL122C 348 nt0.93□□□□□ -2.26
SHC1P39000 YBR012CYBR012C 420 nt0.93□□□□□ -2.26
SHC1P39000 YOR192C-CYOR192C-C 237 nt0.93□□□□□ -2.26
SHC1P39000 YPL182CYPL182C 384 nt0.93□□□□□ -2.26
SHC1P39000 GEA2YEL022W 4380 nt0.93□□□□□ -2.26
SHC1P39000 YDR269CYDR269C 324 nt0.92□□□□□ -2.26
SHC1P39000 tT(AGU)BtT(AGU)B 73 nt0.92□□□□□ -2.26
SHC1P39000 tT(AGU)CtT(AGU)C 73 nt0.92□□□□□ -2.26
SHC1P39000 tT(AGU)DtT(AGU)D 73 nt0.92□□□□□ -2.26
SHC1P39000 tT(AGU)HtT(AGU)H 73 nt0.92□□□□□ -2.26
SHC1P39000 tT(AGU)I1tT(AGU)I1 73 nt0.92□□□□□ -2.26
SHC1P39000 tT(AGU)I2tT(AGU)I2 73 nt0.92□□□□□ -2.26
SHC1P39000 YHR130CYHR130C 336 nt0.92□□□□□ -2.26
SHC1P39000 tT(AGU)JtT(AGU)J 73 nt0.92□□□□□ -2.26
SHC1P39000 tT(AGU)N1tT(AGU)N1 73 nt0.92□□□□□ -2.26
SHC1P39000 tT(AGU)N2tT(AGU)N2 73 nt0.92□□□□□ -2.26
SHC1P39000 tT(AGU)O1tT(AGU)O1 73 nt0.92□□□□□ -2.26
SHC1P39000 tT(AGU)O2tT(AGU)O2 73 nt0.92□□□□□ -2.26
SHC1P39000 UPS1YLR193C 528 nt0.92□□□□□ -2.26
SHC1P39000 BI2Q0110 1272 nt0.91□□□□□ -2.26
SHC1P39000 ZEO1YOL109W 342 nt0.91□□□□□ -2.26
SHC1P39000 ERP4YOR016C 624 nt0.91□□□□□ -2.26
SHC1P39000 snR189snR189 189 nt0.91□□□□□ -2.26
SHC1P39000 ULP2YIL031W 3105 nt0.91□□□□□ -2.26
SHC1P39000 TRS65YGR166W 1683 nt0.91□□□□□ -2.26
SHC1P39000 STO1YMR125W 2586 nt0.9□□□□□ -2.27
SHC1P39000 YHR125WYHR125W 306 nt0.9□□□□□ -2.27
SHC1P39000 YIL059CYIL059C 366 nt0.9□□□□□ -2.27
SHC1P39000 CMC4YMR194C-B 222 nt0.9□□□□□ -2.27
SHC1P39000 YNL303WYNL303W 348 nt0.9□□□□□ -2.27
SHC1P39000 SAS3YBL052C 2496 nt0.89□□□□□ -2.27
SHC1P39000 YDR521WYDR521W 336 nt0.89□□□□□ -2.27
SHC1P39000 YBL071CYBL071C 309 nt0.89□□□□□ -2.27
SHC1P39000 IRC23YOR044W 474 nt0.89□□□□□ -2.27
SHC1P39000 SLY1YDR189W 2001 nt0.89□□□□□ -2.27
SHC1P39000 ALY2YJL084C 3141 nt0.89□□□□□ -2.27
SHC1P39000 LCD1YDR499W 2244 nt0.88□□□□□ -2.27
SHC1P39000 NHP2YDL208W 471 nt0.88□□□□□ -2.27
SHC1P39000 RRT1YBL048W 312 nt0.88□□□□□ -2.27
SHC1P39000 AIM9YER080W 1884 nt0.88□□□□□ -2.27
SHC1P39000 TIM13YGR181W 318 nt0.87□□□□□ -2.27
SHC1P39000 KAP120YPL125W 3099 nt0.86□□□□□ -2.27
SHC1P39000 YDL011CYDL011C 324 nt0.86□□□□□ -2.27
SHC1P39000 snR54snR54 86 nt0.86□□□□□ -2.27
SHC1P39000 PKH2YOL100W 3246 nt0.86□□□□□ -2.27
SHC1P39000 EFR3YMR212C 2349 nt0.86□□□□□ -2.27
SHC1P39000 BUL2YML111W 2763 nt0.85□□□□□ -2.27
SHC1P39000 NPC2YDL046W 522 nt0.85□□□□□ -2.27
SHC1P39000 YLR171WYLR171W 390 nt0.85□□□□□ -2.27
SHC1P39000 TOM22YNL131W 459 nt0.85□□□□□ -2.27
SHC1P39000 YOL013W-BYOL013W-B 291 nt0.85□□□□□ -2.27
SHC1P39000 YOR199WYOR199W 330 nt0.85□□□□□ -2.27
SHC1P39000 YBR200W-AYBR200W-A 165 nt0.85□□□□□ -2.27
SHC1P39000 AI1Q0050 2505 nt0.85□□□□□ -2.27
SHC1P39000 AIM44YPL158C 2277 nt0.85□□□□□ -2.27
SHC1P39000 PDE2YOR360C 1581 nt0.84□□□□□ -2.27
SHC1P39000 FMP27YLR454W 7887 nt0.84□□□□□ -2.27
SHC1P39000 ZIP2YGL249W 2115 nt0.84□□□□□ -2.27
SHC1P39000 RPS27AYKL156W 249 nt0.84□□□□□ -2.27
SHC1P39000 YGR042WYGR042W 816 nt0.83□□□□□ -2.28
SHC1P39000 YJL020W-AYJL020W-A 258 nt0.83□□□□□ -2.28
SHC1P39000 YLR287CYLR287C 1068 nt0.83□□□□□ -2.28
SHC1P39000 SLI15YBR156C 2097 nt0.82□□□□□ -2.28
SHC1P39000 MMS4YBR098W 2076 nt0.82□□□□□ -2.28
SHC1P39000 CBS1YDL069C 690 nt0.81□□□□□ -2.28
SHC1P39000 YJL135WYJL135W 318 nt0.81□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 63.2 ms