Protein–RNA interactions for Protein: P25233

Ndn, Necdin, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NdnP25233 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NdnP25233 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NdnP25233 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NdnP25233 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NdnP25233 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NdnP25233 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NdnP25233 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NdnP25233 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NdnP25233 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
NdnP25233 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NdnP25233 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.02□□□□□ -0.17
NdnP25233 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NdnP25233 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NdnP25233 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
NdnP25233 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
NdnP25233 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
NdnP25233 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
NdnP25233 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NdnP25233 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.01□□□□□ -0.17
NdnP25233 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NdnP25233 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.01□□□□□ -0.17
NdnP25233 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NdnP25233 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NdnP25233 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NdnP25233 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NdnP25233 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.01□□□□□ -0.17
NdnP25233 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.01□□□□□ -0.17
NdnP25233 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NdnP25233 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NdnP25233 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NdnP25233 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NdnP25233 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NdnP25233 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NdnP25233 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NdnP25233 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NdnP25233 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NdnP25233 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14□□□□□ -0.17
NdnP25233 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14□□□□□ -0.17
NdnP25233 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NdnP25233 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NdnP25233 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14□□□□□ -0.17
NdnP25233 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NdnP25233 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NdnP25233 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NdnP25233 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NdnP25233 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NdnP25233 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14□□□□□ -0.17
NdnP25233 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NdnP25233 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NdnP25233 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14□□□□□ -0.17
NdnP25233 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14□□□□□ -0.17
NdnP25233 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14□□□□□ -0.17
NdnP25233 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14□□□□□ -0.17
NdnP25233 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NdnP25233 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
NdnP25233 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NdnP25233 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
NdnP25233 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NdnP25233 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
NdnP25233 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NdnP25233 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NdnP25233 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NdnP25233 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
NdnP25233 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NdnP25233 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NdnP25233 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
NdnP25233 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NdnP25233 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NdnP25233 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NdnP25233 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.99□□□□□ -0.17
NdnP25233 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NdnP25233 Gm12922-201ENSMUST00000120626 809 ntBASIC13.99□□□□□ -0.17
NdnP25233 Gm14117-201ENSMUST00000122417 843 ntBASIC13.99□□□□□ -0.17
NdnP25233 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.99□□□□□ -0.17
NdnP25233 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NdnP25233 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NdnP25233 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NdnP25233 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
NdnP25233 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NdnP25233 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NdnP25233 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NdnP25233 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
NdnP25233 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NdnP25233 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
NdnP25233 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NdnP25233 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NdnP25233 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NdnP25233 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NdnP25233 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NdnP25233 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NdnP25233 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NdnP25233 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NdnP25233 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.98□□□□□ -0.17
NdnP25233 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NdnP25233 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NdnP25233 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NdnP25233 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC13.98□□□□□ -0.17
NdnP25233 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NdnP25233 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NdnP25233 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms