Protein–RNA interactions for Protein: P17255

VMA1, V-type proton ATPase catalytic subunit A, yeastyeast

Known RBP Predictions only

Length 1,071 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA1P17255 SAP190YKR028W 3102 nt3.61□□□□□ -1.83
VMA1P17255 SPA2YLL021W 4401 nt3.61□□□□□ -1.83
VMA1P17255 MMS22YLR320W 4365 nt3.61□□□□□ -1.83
VMA1P17255 RPS26AYGL189C 360 nt3.6□□□□□ -1.83
VMA1P17255 YKL096C-BYKL096C-B 150 nt3.6□□□□□ -1.83
VMA1P17255 YDR186CYDR186C 2634 nt3.6□□□□□ -1.83
VMA1P17255 KAP120YPL125W 3099 nt3.6□□□□□ -1.83
VMA1P17255 NEW1YPL226W 3591 nt3.59□□□□□ -1.83
VMA1P17255 SMC3YJL074C 3693 nt3.59□□□□□ -1.83
VMA1P17255 SEC1YDR164C 2175 nt3.59□□□□□ -1.84
VMA1P17255 LCL1YPL056C 306 nt3.58□□□□□ -1.84
VMA1P17255 PHO91YNR013C 2685 nt3.58□□□□□ -1.84
VMA1P17255 MMS1YPR164W 4224 nt3.58□□□□□ -1.84
VMA1P17255 TSC11YER093C 4293 nt3.58□□□□□ -1.84
VMA1P17255 PAU10YDR542W 363 nt3.57□□□□□ -1.84
VMA1P17255 PAU11YGL261C 363 nt3.57□□□□□ -1.84
VMA1P17255 tV(CAC)DtV(CAC)D 73 nt3.57□□□□□ -1.84
VMA1P17255 tV(CAC)HtV(CAC)H 73 nt3.57□□□□□ -1.84
VMA1P17255 RPS22AYJL190C 393 nt3.57□□□□□ -1.84
VMA1P17255 PAU4YLR461W 363 nt3.57□□□□□ -1.84
VMA1P17255 ENV11YGR071C 2583 nt3.57□□□□□ -1.84
VMA1P17255 tK(UUU)DtK(UUU)D 73 nt3.56□□□□□ -1.84
VMA1P17255 tK(UUU)G1tK(UUU)G1 73 nt3.56□□□□□ -1.84
VMA1P17255 tK(UUU)G2tK(UUU)G2 73 nt3.56□□□□□ -1.84
VMA1P17255 tK(UUU)KtK(UUU)K 73 nt3.56□□□□□ -1.84
VMA1P17255 tK(UUU)LtK(UUU)L 73 nt3.56□□□□□ -1.84
VMA1P17255 tK(UUU)OtK(UUU)O 73 nt3.56□□□□□ -1.84
VMA1P17255 tK(UUU)PtK(UUU)P 73 nt3.56□□□□□ -1.84
VMA1P17255 ALK1YGL021W 2283 nt3.56□□□□□ -1.84
VMA1P17255 YMR317WYMR317W 3423 nt3.55□□□□□ -1.84
VMA1P17255 APL2YKL135C 2181 nt3.55□□□□□ -1.84
VMA1P17255 RTT107YHR154W 3213 nt3.55□□□□□ -1.84
VMA1P17255 UBP15YMR304W 3693 nt3.53□□□□□ -1.84
VMA1P17255 MET6YER091C 2304 nt3.53□□□□□ -1.84
VMA1P17255 RPL37BYDR500C 267 nt3.53□□□□□ -1.84
VMA1P17255 YJL127W-AYJL127W-A 117 nt3.53□□□□□ -1.84
VMA1P17255 YHR080CYHR080C 4038 nt3.53□□□□□ -1.85
VMA1P17255 UBP1YDL122W 2430 nt3.52□□□□□ -1.85
VMA1P17255 STU2YLR045C 2667 nt3.52□□□□□ -1.85
VMA1P17255 MGM1YOR211C 2646 nt3.52□□□□□ -1.85
VMA1P17255 VAS1YGR094W 3315 nt3.52□□□□□ -1.85
VMA1P17255 TAH1YCR060W 336 nt3.52□□□□□ -1.85
VMA1P17255 VMR1YHL035C 4779 nt3.52□□□□□ -1.85
VMA1P17255 DCP2YNL118C 2913 nt3.52□□□□□ -1.85
VMA1P17255 MET5YJR137C 4329 nt3.51□□□□□ -1.85
VMA1P17255 FLO5YHR211W 3228 nt3.51□□□□□ -1.85
VMA1P17255 AUS1YOR011W 4185 nt3.51□□□□□ -1.85
VMA1P17255 NOP14YDL148C 2433 nt3.51□□□□□ -1.85
VMA1P17255 DBP10YDL031W 2988 nt3.51□□□□□ -1.85
VMA1P17255 GCV2YMR189W 3105 nt3.5□□□□□ -1.85
VMA1P17255 VTC3YPL019C 2508 nt3.5□□□□□ -1.85
VMA1P17255 YDR210WYDR210W 228 nt3.5□□□□□ -1.85
VMA1P17255 snR47snR47 99 nt3.5□□□□□ -1.85
VMA1P17255 STU1YBL034C 4542 nt3.5□□□□□ -1.85
VMA1P17255 YGL123C-AYGL123C-A 231 nt3.49□□□□□ -1.85
VMA1P17255 VPS16YPL045W 2397 nt3.49□□□□□ -1.85
VMA1P17255 RRP5YMR229C 5190 nt3.49□□□□□ -1.85
VMA1P17255 NFT1YKR103W 3657 nt3.49□□□□□ -1.85
VMA1P17255 SGM1YJR134C 2124 nt3.49□□□□□ -1.85
VMA1P17255 RPO41YFL036W 4056 nt3.49□□□□□ -1.85
VMA1P17255 ASE1YOR058C 2658 nt3.48□□□□□ -1.85
VMA1P17255 YML002WYML002W 2214 nt3.48□□□□□ -1.85
VMA1P17255 tC(GCA)BtC(GCA)B 72 nt3.47□□□□□ -1.85
VMA1P17255 tC(GCA)GtC(GCA)G 72 nt3.47□□□□□ -1.85
VMA1P17255 tC(GCA)P1tC(GCA)P1 72 nt3.47□□□□□ -1.85
VMA1P17255 tC(GCA)P2tC(GCA)P2 72 nt3.47□□□□□ -1.85
VMA1P17255 COG4YPR105C 2586 nt3.47□□□□□ -1.85
VMA1P17255 EAF1YDR359C 2949 nt3.46□□□□□ -1.86
VMA1P17255 PKH1YDR490C 2301 nt3.45□□□□□ -1.86
VMA1P17255 ORC3YLL004W 1851 nt3.45□□□□□ -1.86
VMA1P17255 YKL100W-AYKL100W-A 90 nt3.45□□□□□ -1.86
VMA1P17255 YOR394C-AYOR394C-A 168 nt3.45□□□□□ -1.86
VMA1P17255 MAK10YEL053C 2202 nt3.44□□□□□ -1.86
VMA1P17255 DSE4YNR067C 3354 nt3.44□□□□□ -1.86
VMA1P17255 SWR1YDR334W 4545 nt3.44□□□□□ -1.86
VMA1P17255 STE6YKL209C 3873 nt3.43□□□□□ -1.86
VMA1P17255 SVL3YPL032C 2478 nt3.43□□□□□ -1.86
VMA1P17255 YJR039WYJR039W 3366 nt3.42□□□□□ -1.86
VMA1P17255 YGR109W-BYGR109W-B 4644 nt3.42□□□□□ -1.86
VMA1P17255 CDC53YDL132W 2448 nt3.41□□□□□ -1.86
VMA1P17255 YGR146C-AYGR146C-A 162 nt3.41□□□□□ -1.86
VMA1P17255 YLR149C-AYLR149C-A 87 nt3.41□□□□□ -1.86
VMA1P17255 YLR232WYLR232W 348 nt3.41□□□□□ -1.86
VMA1P17255 PKH2YOL100W 3246 nt3.4□□□□□ -1.86
VMA1P17255 YLR286W-AYLR286W-A 135 nt3.4□□□□□ -1.87
VMA1P17255 YBR196C-AYBR196C-A 150 nt3.4□□□□□ -1.87
VMA1P17255 YDL206WYDL206W 2289 nt3.4□□□□□ -1.87
VMA1P17255 BMS1YPL217C 3552 nt3.4□□□□□ -1.87
VMA1P17255 GCN1YGL195W 8019 nt3.4□□□□□ -1.87
VMA1P17255 UFD2YDL190C 2886 nt3.39□□□□□ -1.87
VMA1P17255 IST2YBR086C 2841 nt3.39□□□□□ -1.87
VMA1P17255 TAO3YIL129C 7131 nt3.39□□□□□ -1.87
VMA1P17255 DRS2YAL026C 4068 nt3.39□□□□□ -1.87
VMA1P17255 TBS1YBR150C 3285 nt3.37□□□□□ -1.87
VMA1P17255 SDC25YLL016W 3147 nt3.37□□□□□ -1.87
VMA1P17255 tF(GAA)DtF(GAA)D 73 nt3.37□□□□□ -1.87
VMA1P17255 tF(GAA)NtF(GAA)N 73 nt3.37□□□□□ -1.87
VMA1P17255 CIN8YEL061C 3003 nt3.37□□□□□ -1.87
VMA1P17255 POL3YDL102W 3294 nt3.37□□□□□ -1.87
VMA1P17255 BUD4YJR092W 4344 nt3.36□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 86.6 ms