Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD48P09326 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CD48P09326 CROCCP5-201ENST00000436658 830 ntBASIC20.88■□□□□ 0.93
CD48P09326 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.88■□□□□ 0.93
CD48P09326 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.88■□□□□ 0.93
CD48P09326 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CD48P09326 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD48P09326 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD48P09326 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CD48P09326 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD48P09326 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.88■□□□□ 0.93
CD48P09326 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.88■□□□□ 0.93
CD48P09326 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CD48P09326 BX119927.1-201ENST00000636596 1552 ntBASIC20.88■□□□□ 0.93
CD48P09326 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CD48P09326 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD48P09326 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD48P09326 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CD48P09326 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD48P09326 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CD48P09326 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD48P09326 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD48P09326 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.87■□□□□ 0.93
CD48P09326 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CD48P09326 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CD48P09326 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CD48P09326 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.87■□□□□ 0.93
CD48P09326 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.87■□□□□ 0.93
CD48P09326 MIR663A-201ENST00000385250 93 ntBASIC20.87■□□□□ 0.93
CD48P09326 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD48P09326 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.87■□□□□ 0.93
CD48P09326 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CD48P09326 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CD48P09326 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.87■□□□□ 0.93
CD48P09326 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
CD48P09326 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD48P09326 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD48P09326 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD48P09326 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD48P09326 AC026185.1-201ENST00000445748 174 ntBASIC20.86■□□□□ 0.93
CD48P09326 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.86■□□□□ 0.93
CD48P09326 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD48P09326 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
CD48P09326 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CD48P09326 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD48P09326 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD48P09326 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.86■□□□□ 0.93
CD48P09326 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.86■□□□□ 0.93
CD48P09326 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.85■□□□□ 0.93
CD48P09326 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD48P09326 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CD48P09326 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD48P09326 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD48P09326 AL512625.2-201ENST00000417533 625 ntBASIC20.85■□□□□ 0.93
CD48P09326 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
CD48P09326 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.85■□□□□ 0.93
CD48P09326 AC133552.2-202ENST00000575694 574 ntBASIC20.85■□□□□ 0.93
CD48P09326 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.85■□□□□ 0.93
CD48P09326 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD48P09326 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.85■□□□□ 0.93
CD48P09326 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD48P09326 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD48P09326 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.84■□□□□ 0.93
CD48P09326 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD48P09326 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD48P09326 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.84■□□□□ 0.93
CD48P09326 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.84■□□□□ 0.93
CD48P09326 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD48P09326 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.84■□□□□ 0.93
CD48P09326 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
CD48P09326 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CD48P09326 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD48P09326 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CD48P09326 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.84■□□□□ 0.93
CD48P09326 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD48P09326 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.84■□□□□ 0.93
CD48P09326 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD48P09326 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD48P09326 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
CD48P09326 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.84■□□□□ 0.93
CD48P09326 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD48P09326 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CD48P09326 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD48P09326 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CD48P09326 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD48P09326 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.93
CD48P09326 AC125437.2-201ENST00000625180 2167 ntBASIC20.83■□□□□ 0.93
CD48P09326 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.83■□□□□ 0.93
CD48P09326 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD48P09326 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CD48P09326 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.83■□□□□ 0.93
CD48P09326 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD48P09326 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.83■□□□□ 0.93
CD48P09326 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CD48P09326 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CD48P09326 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
CD48P09326 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD48P09326 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.83■□□□□ 0.93
CD48P09326 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.83■□□□□ 0.93
CD48P09326 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms