Protein–RNA interactions for Protein: P08425

MSF1, Phenylalanine--tRNA ligase, mitochondrial, yeastyeast

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSF1P08425 YDR182W-AYDR182W-A 204 nt0.84□□□□□ -2.27
MSF1P08425 YAP3YHL009C 993 nt0.84□□□□□ -2.27
MSF1P08425 YIL059CYIL059C 366 nt0.84□□□□□ -2.27
MSF1P08425 MRPL31YKL138C 396 nt0.84□□□□□ -2.27
MSF1P08425 YER076W-AYER076W-A 348 nt0.83□□□□□ -2.28
MSF1P08425 NBL1YHR199C-A 222 nt0.83□□□□□ -2.28
MSF1P08425 UTP20YBL004W 7482 nt0.83□□□□□ -2.28
MSF1P08425 NUP157YER105C 4176 nt0.82□□□□□ -2.28
MSF1P08425 YDR269CYDR269C 324 nt0.82□□□□□ -2.28
MSF1P08425 YER135CYER135C 393 nt0.82□□□□□ -2.28
MSF1P08425 YOL014WYOL014W 375 nt0.82□□□□□ -2.28
MSF1P08425 YOR199WYOR199W 330 nt0.82□□□□□ -2.28
MSF1P08425 SLI15YBR156C 2097 nt0.82□□□□□ -2.28
MSF1P08425 EFR3YMR212C 2349 nt0.81□□□□□ -2.28
MSF1P08425 YHR139C-AYHR139C-A 312 nt0.81□□□□□ -2.28
MSF1P08425 URM1YIL008W 300 nt0.81□□□□□ -2.28
MSF1P08425 RRT1YBL048W 312 nt0.81□□□□□ -2.28
MSF1P08425 ENV11YGR071C 2583 nt0.8□□□□□ -2.28
MSF1P08425 YDL073WYDL073W 2955 nt0.8□□□□□ -2.28
MSF1P08425 RPL9AYGL147C 576 nt0.8□□□□□ -2.28
MSF1P08425 BIG1YHR101C 1008 nt0.8□□□□□ -2.28
MSF1P08425 RPS27AYKL156W 249 nt0.8□□□□□ -2.28
MSF1P08425 YMR160WYMR160W 2451 nt0.8□□□□□ -2.28
MSF1P08425 NPC2YDL046W 522 nt0.79□□□□□ -2.28
MSF1P08425 ALY2YJL084C 3141 nt0.78□□□□□ -2.28
MSF1P08425 YPR117WYPR117W 7470 nt0.78□□□□□ -2.28
MSF1P08425 WAR1YML076C 2835 nt0.78□□□□□ -2.28
MSF1P08425 SLD3YGL113W 2007 nt0.78□□□□□ -2.28
MSF1P08425 GPI15YNL038W 690 nt0.78□□□□□ -2.28
MSF1P08425 ZIP2YGL249W 2115 nt0.77□□□□□ -2.29
MSF1P08425 SEC1YDR164C 2175 nt0.76□□□□□ -2.29
MSF1P08425 YCR001WYCR001W 315 nt0.76□□□□□ -2.29
MSF1P08425 YKL145W-AYKL145W-A 93 nt0.76□□□□□ -2.29
MSF1P08425 YPL182CYPL182C 384 nt0.76□□□□□ -2.29
MSF1P08425 YDL196WYDL196W 330 nt0.75□□□□□ -2.29
MSF1P08425 YIL066W-AYIL066W-A 444 nt0.75□□□□□ -2.29
MSF1P08425 BUD3YCL014W 4911 nt0.75□□□□□ -2.29
MSF1P08425 NHP2YDL208W 471 nt0.74□□□□□ -2.29
MSF1P08425 EAF6YJR082C 342 nt0.74□□□□□ -2.29
MSF1P08425 YLR269CYLR269C 351 nt0.74□□□□□ -2.29
MSF1P08425 IES4YOR189W 351 nt0.74□□□□□ -2.29
MSF1P08425 YDR521WYDR521W 336 nt0.73□□□□□ -2.29
MSF1P08425 CMC4YMR194C-B 222 nt0.73□□□□□ -2.29
MSF1P08425 PBI2YNL015W 228 nt0.73□□□□□ -2.29
MSF1P08425 YOR108C-AYOR108C-A 210 nt0.73□□□□□ -2.29
MSF1P08425 YPR153WYPR153W 423 nt0.73□□□□□ -2.29
MSF1P08425 WIP1YDR374W-A 270 nt0.72□□□□□ -2.29
MSF1P08425 YER087C-AYER087C-A 552 nt0.72□□□□□ -2.29
MSF1P08425 ALG13YGL047W 609 nt0.72□□□□□ -2.29
MSF1P08425 tT(AGU)BtT(AGU)B 73 nt0.72□□□□□ -2.29
MSF1P08425 tT(AGU)CtT(AGU)C 73 nt0.72□□□□□ -2.29
MSF1P08425 tT(AGU)DtT(AGU)D 73 nt0.72□□□□□ -2.29
MSF1P08425 tT(AGU)HtT(AGU)H 73 nt0.72□□□□□ -2.29
MSF1P08425 tT(AGU)I1tT(AGU)I1 73 nt0.72□□□□□ -2.29
MSF1P08425 tT(AGU)I2tT(AGU)I2 73 nt0.72□□□□□ -2.29
MSF1P08425 tT(AGU)JtT(AGU)J 73 nt0.72□□□□□ -2.29
MSF1P08425 tT(AGU)N1tT(AGU)N1 73 nt0.72□□□□□ -2.29
MSF1P08425 tT(AGU)N2tT(AGU)N2 73 nt0.72□□□□□ -2.29
MSF1P08425 tT(AGU)O1tT(AGU)O1 73 nt0.72□□□□□ -2.29
MSF1P08425 tT(AGU)O2tT(AGU)O2 73 nt0.72□□□□□ -2.29
MSF1P08425 DBP6YNR038W 1890 nt0.71□□□□□ -2.3
MSF1P08425 GPG1YGL121C 381 nt0.7□□□□□ -2.3
MSF1P08425 TIM13YGR181W 318 nt0.7□□□□□ -2.3
MSF1P08425 YKL202WYKL202W 582 nt0.7□□□□□ -2.3
MSF1P08425 RPB10YOR210W 213 nt0.7□□□□□ -2.3
MSF1P08425 YPR159C-AYPR159C-A 102 nt0.7□□□□□ -2.3
MSF1P08425 GEA2YEL022W 4380 nt0.69□□□□□ -2.3
MSF1P08425 SWF1YDR126W 1011 nt0.69□□□□□ -2.3
MSF1P08425 EMC4YGL231C 573 nt0.69□□□□□ -2.3
MSF1P08425 RPF1YHR088W 888 nt0.69□□□□□ -2.3
MSF1P08425 YMR290W-AYMR290W-A 348 nt0.69□□□□□ -2.3
MSF1P08425 YBR076C-AYBR076C-A 267 nt0.69□□□□□ -2.3
MSF1P08425 ISD11YER048W-A 285 nt0.67□□□□□ -2.3
MSF1P08425 YGR042WYGR042W 816 nt0.67□□□□□ -2.3
MSF1P08425 YJL135WYJL135W 318 nt0.67□□□□□ -2.3
MSF1P08425 NFU1YKL040C 771 nt0.67□□□□□ -2.3
MSF1P08425 PKH2YOL100W 3246 nt0.66□□□□□ -2.3
MSF1P08425 YHR125WYHR125W 306 nt0.66□□□□□ -2.3
MSF1P08425 YML108WYML108W 318 nt0.66□□□□□ -2.3
MSF1P08425 PAN2YGL094C 3348 nt0.66□□□□□ -2.3
MSF1P08425 YHR063W-AYHR063W-A 336 nt0.65□□□□□ -2.31
MSF1P08425 YMR141W-AYMR141W-A 225 nt0.65□□□□□ -2.31
MSF1P08425 YNR025CYNR025C 360 nt0.65□□□□□ -2.31
MSF1P08425 RKR1YMR247C 4689 nt0.65□□□□□ -2.31
MSF1P08425 STE18YJR086W 333 nt0.64□□□□□ -2.31
MSF1P08425 YMR272W-AYMR272W-A 114 nt0.64□□□□□ -2.31
MSF1P08425 LOA1YPR139C 903 nt0.64□□□□□ -2.31
MSF1P08425 UBC7YMR022W 498 nt0.63□□□□□ -2.31
MSF1P08425 YMR031W-AYMR031W-A 327 nt0.63□□□□□ -2.31
MSF1P08425 YOR218CYOR218C 420 nt0.63□□□□□ -2.31
MSF1P08425 YBL071CYBL071C 309 nt0.62□□□□□ -2.31
MSF1P08425 YOL160WYOL160W 342 nt0.62□□□□□ -2.31
MSF1P08425 YPL261CYPL261C 309 nt0.62□□□□□ -2.31
MSF1P08425 YER084W-AYER084W-A 513 nt0.61□□□□□ -2.31
MSF1P08425 YMR321CYMR321C 318 nt0.61□□□□□ -2.31
MSF1P08425 YOR282WYOR282W 321 nt0.61□□□□□ -2.31
MSF1P08425 TRS65YGR166W 1683 nt0.61□□□□□ -2.31
MSF1P08425 YLL007CYLL007C 1998 nt0.6□□□□□ -2.31
MSF1P08425 YDL011CYDL011C 324 nt0.6□□□□□ -2.31
MSF1P08425 snR72snR72 98 nt0.6□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 23.3 ms