Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSBP07858 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSBP07858 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTSBP07858 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CTSBP07858 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.13■□□□□ 0.65
CTSBP07858 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.13■□□□□ 0.65
CTSBP07858 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTSBP07858 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSBP07858 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CTSBP07858 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSBP07858 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTSBP07858 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSBP07858 AC073314.1-201ENST00000568729 2216 ntBASIC19.12■□□□□ 0.65
CTSBP07858 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CTSBP07858 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CTSBP07858 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
CTSBP07858 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.12■□□□□ 0.65
CTSBP07858 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.12■□□□□ 0.65
CTSBP07858 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSBP07858 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSBP07858 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTSBP07858 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.12■□□□□ 0.65
CTSBP07858 AL390719.1-204ENST00000412397 1219 ntBASIC19.12■□□□□ 0.65
CTSBP07858 AC023632.3-201ENST00000521633 145 ntBASIC19.12■□□□□ 0.65
CTSBP07858 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.12■□□□□ 0.65
CTSBP07858 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTSBP07858 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.12■□□□□ 0.65
CTSBP07858 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSBP07858 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSBP07858 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CTSBP07858 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTSBP07858 AC092720.2-201ENST00000602388 1665 ntBASIC19.11■□□□□ 0.65
CTSBP07858 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTSBP07858 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.11■□□□□ 0.65
CTSBP07858 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CTSBP07858 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CTSBP07858 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTSBP07858 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTSBP07858 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTSBP07858 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CTSBP07858 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.11■□□□□ 0.65
CTSBP07858 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CTSBP07858 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CTSBP07858 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.11■□□□□ 0.65
CTSBP07858 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTSBP07858 RPPH1-201ENST00000516869 333 ntBASIC19.11■□□□□ 0.65
CTSBP07858 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.11■□□□□ 0.65
CTSBP07858 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.11■□□□□ 0.65
CTSBP07858 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTSBP07858 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTSBP07858 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.1■□□□□ 0.65
CTSBP07858 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTSBP07858 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTSBP07858 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CTSBP07858 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.1■□□□□ 0.65
CTSBP07858 MTDHP1-201ENST00000605323 784 ntBASIC19.1■□□□□ 0.65
CTSBP07858 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.1■□□□□ 0.65
CTSBP07858 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.1■□□□□ 0.65
CTSBP07858 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTSBP07858 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CTSBP07858 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTSBP07858 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTSBP07858 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTSBP07858 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.1■□□□□ 0.65
CTSBP07858 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.09■□□□□ 0.65
CTSBP07858 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTSBP07858 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTSBP07858 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTSBP07858 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.09■□□□□ 0.65
CTSBP07858 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTSBP07858 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.09■□□□□ 0.65
CTSBP07858 AC093827.2-201ENST00000512654 315 ntBASIC19.09■□□□□ 0.65
CTSBP07858 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.09■□□□□ 0.65
CTSBP07858 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.09■□□□□ 0.65
CTSBP07858 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.09■□□□□ 0.65
CTSBP07858 AL023875.1-201ENST00000640777 796 ntBASIC19.09■□□□□ 0.65
CTSBP07858 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.09■□□□□ 0.65
CTSBP07858 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTSBP07858 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTSBP07858 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.08■□□□□ 0.65
CTSBP07858 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTSBP07858 AC092667.1-201ENST00000434301 2586 ntBASIC19.08■□□□□ 0.65
CTSBP07858 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.08■□□□□ 0.65
CTSBP07858 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
CTSBP07858 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTSBP07858 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.08■□□□□ 0.64
CTSBP07858 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.08■□□□□ 0.64
CTSBP07858 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.64
CTSBP07858 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTSBP07858 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTSBP07858 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSBP07858 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
CTSBP07858 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTSBP07858 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSBP07858 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSBP07858 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CTSBP07858 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.07■□□□□ 0.64
CTSBP07858 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSBP07858 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSBP07858 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms