Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC22.18■■□□□ 1.14
TNRC18O15417 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC22.18■■□□□ 1.14
TNRC18O15417 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TNRC18O15417 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TNRC18O15417 PPIH-202ENST00000372549 327 ntTSL 3 BASIC22.18■■□□□ 1.14
TNRC18O15417 FDX2-206ENST00000492239 773 ntTSL 2 BASIC22.18■■□□□ 1.14
TNRC18O15417 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TNRC18O15417 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TNRC18O15417 AC141257.4-201ENST00000634557 245 ntBASIC22.18■■□□□ 1.14
TNRC18O15417 AC136944.6-201ENST00000634818 245 ntBASIC22.18■■□□□ 1.14
TNRC18O15417 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TNRC18O15417 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TNRC18O15417 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
TNRC18O15417 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TNRC18O15417 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC22.17■■□□□ 1.14
TNRC18O15417 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.17■■□□□ 1.14
TNRC18O15417 AC106795.1-205ENST00000512851 1056 ntBASIC22.17■■□□□ 1.14
TNRC18O15417 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC22.17■■□□□ 1.14
TNRC18O15417 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
TNRC18O15417 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TNRC18O15417 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.17■■□□□ 1.14
TNRC18O15417 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TNRC18O15417 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.17■■□□□ 1.14
TNRC18O15417 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TNRC18O15417 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC22.17■■□□□ 1.14
TNRC18O15417 AL121749.1-202ENST00000609313 2153 ntBASIC22.17■■□□□ 1.14
TNRC18O15417 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TNRC18O15417 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TNRC18O15417 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TNRC18O15417 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TNRC18O15417 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TNRC18O15417 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TNRC18O15417 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TNRC18O15417 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TNRC18O15417 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TNRC18O15417 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TNRC18O15417 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.16■■□□□ 1.14
TNRC18O15417 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TNRC18O15417 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TNRC18O15417 HIST1H2APS4-201ENST00000362070 348 ntBASIC22.16■■□□□ 1.14
TNRC18O15417 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
TNRC18O15417 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC22.16■■□□□ 1.14
TNRC18O15417 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
TNRC18O15417 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.16■■□□□ 1.14
TNRC18O15417 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.16■■□□□ 1.14
TNRC18O15417 HLA-A-201ENST00000376802 1334 ntBASIC22.16■■□□□ 1.14
TNRC18O15417 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.16■■□□□ 1.14
TNRC18O15417 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TNRC18O15417 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TNRC18O15417 CCR12P-201ENST00000446203 998 ntBASIC22.16■■□□□ 1.14
TNRC18O15417 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.16■■□□□ 1.14
TNRC18O15417 TBCB-205ENST00000585746 875 ntTSL 3 BASIC22.16■■□□□ 1.14
TNRC18O15417 AL139424.1-201ENST00000607572 797 ntBASIC22.16■■□□□ 1.14
TNRC18O15417 HYMAI.1-201ENST00000620949 238 ntBASIC22.16■■□□□ 1.14
TNRC18O15417 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
TNRC18O15417 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TNRC18O15417 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TNRC18O15417 TSPY12P-201ENST00000421279 868 ntBASIC22.15■■□□□ 1.14
TNRC18O15417 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TNRC18O15417 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TNRC18O15417 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC22.15■■□□□ 1.14
TNRC18O15417 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TNRC18O15417 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TNRC18O15417 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC22.15■■□□□ 1.14
TNRC18O15417 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC22.15■■□□□ 1.14
TNRC18O15417 ETFA-216ENST00000560726 942 ntTSL 3 BASIC22.15■■□□□ 1.14
TNRC18O15417 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.15■■□□□ 1.14
TNRC18O15417 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC22.15■■□□□ 1.14
TNRC18O15417 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
TNRC18O15417 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TNRC18O15417 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.15■■□□□ 1.14
TNRC18O15417 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC22.14■■□□□ 1.14
TNRC18O15417 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TNRC18O15417 RNA5SP419-201ENST00000515908 135 ntBASIC22.14■■□□□ 1.14
TNRC18O15417 AL662844.1-201ENST00000546340 181 ntBASIC22.14■■□□□ 1.14
TNRC18O15417 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TNRC18O15417 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TNRC18O15417 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TNRC18O15417 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TNRC18O15417 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TNRC18O15417 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
TNRC18O15417 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC22.14■■□□□ 1.13
TNRC18O15417 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TNRC18O15417 AC137767.1-201ENST00000602918 1920 ntBASIC22.14■■□□□ 1.13
TNRC18O15417 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.14■■□□□ 1.13
TNRC18O15417 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
TNRC18O15417 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.14■■□□□ 1.13
TNRC18O15417 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
TNRC18O15417 AC027796.2-201ENST00000575326 344 ntBASIC22.14■■□□□ 1.13
TNRC18O15417 BX640515.1-201ENST00000617215 977 ntBASIC22.14■■□□□ 1.13
TNRC18O15417 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TNRC18O15417 KRT18P1-202ENST00000452408 1331 ntBASIC22.13■■□□□ 1.13
TNRC18O15417 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TNRC18O15417 AC079776.4-201ENST00000511039 504 ntBASIC22.13■■□□□ 1.13
TNRC18O15417 PRSS44-201ENST00000515154 1146 ntBASIC22.13■■□□□ 1.13
TNRC18O15417 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TNRC18O15417 AC092865.5-201ENST00000545435 363 ntBASIC22.13■■□□□ 1.13
TNRC18O15417 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.13■■□□□ 1.13
TNRC18O15417 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC22.12■■□□□ 1.13
TNRC18O15417 SPDYE13P-201ENST00000445314 798 ntBASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms