Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 AL117351.1-201ENST00000438864 766 ntBASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 AL353754.1-201ENST00000440219 340 ntBASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 AC002553.1-201ENST00000442828 802 ntBASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 ENTPD1-AS1-206ENST00000449197 523 ntTSL 2 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 MKNK1-207ENST00000465783 464 ntTSL 2 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 ALG13-214ENST00000482742 620 ntTSL 2 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 RN7SL314P-201ENST00000490735 292 ntBASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 FAM177A1P1-201ENST00000503598 473 ntBASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 CA1-219ENST00000523022 1208 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 AC087894.2-201ENST00000541797 462 ntTSL 4 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 AC090371.1-201ENST00000580071 558 ntTSL 4 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 AC129492.5-201ENST00000603489 315 ntBASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 AC104117.5-201ENST00000606195 547 ntBASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 AC016252.1-201ENST00000609721 474 ntBASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 FAM184A-213ENST00000617072 1251 ntTSL 2 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 AC010320.5-201ENST00000619124 676 ntBASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 AC010653.3-201ENST00000635332 232 ntBASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 SLC16A1P1-201ENST00000486743 1510 ntBASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 GIMAP8-201ENST00000307271 4184 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 RNA5SP301-201ENST00000362537 121 ntBASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 RNA5SP297-201ENST00000391029 113 ntBASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 AL353151.1-201ENST00000402406 604 ntBASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 VN1R53P-201ENST00000429536 957 ntBASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 DNAJA1P6-201ENST00000437347 354 ntBASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 AC231532.1-201ENST00000438584 312 ntBASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 EAF2-202ENST00000451944 960 ntTSL 2 BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 PRKG1-AS1-203ENST00000452247 886 ntTSL 5 BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 NPIPP1-203ENST00000547107 1071 ntBASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 MRPL45P2-203ENST00000573318 473 ntBASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 RN7SL311P-201ENST00000579858 306 ntBASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 NDUFA3P1-201ENST00000588007 252 ntBASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 AC005262.1-201ENST00000588562 362 ntBASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 AC068313.1-201ENST00000604028 1008 ntBASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 AC116003.3-201ENST00000612669 541 ntBASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 ACACA-232ENST00000614438 569 ntTSL 2 BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 KCNIP4-204ENST00000382150 1645 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 HSP90AB2P-201ENST00000507090 2176 ntBASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CDK5RAP1Q96SZ6 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 AL138847.1-201ENST00000258651 546 ntBASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 FAM118B-201ENST00000360194 1616 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 AL109918.1-202ENST00000406724 436 ntBASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 IFNA12P-201ENST00000413147 571 ntBASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 YWHAZP3-201ENST00000415292 738 ntBASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 AC003071.2-201ENST00000423857 315 ntBASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 EIF2S2P3-201ENST00000428356 999 ntBASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 ATP5G1P6-201ENST00000451206 412 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms