Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SLC1A1P43005 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
SLC1A1P43005 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SLC1A1P43005 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
SLC1A1P43005 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
SLC1A1P43005 GLRA4-201ENST00000372617 1795 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
SLC1A1P43005 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
SLC1A1P43005 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
SLC1A1P43005 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SLC1A1P43005 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
SLC1A1P43005 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SLC1A1P43005 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SLC1A1P43005 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SLC1A1P43005 AL512604.2-201ENST00000426946 1314 ntTSL 5 BASIC8.15□□□□□ -1.1
SLC1A1P43005 AL731537.1-201ENST00000343087 421 ntTSL 3 BASIC8.15□□□□□ -1.1
SLC1A1P43005 C1orf146-202ENST00000370375 830 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SLC1A1P43005 SNORA70I-201ENST00000384544 135 ntBASIC8.15□□□□□ -1.1
SLC1A1P43005 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
SLC1A1P43005 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SLC1A1P43005 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
SLC1A1P43005 AL022100.1-202ENST00000421214 548 ntBASIC8.15□□□□□ -1.1
SLC1A1P43005 ATP13A4-AS1-201ENST00000426459 795 ntTSL 3 BASIC8.15□□□□□ -1.1
SLC1A1P43005 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC8.15□□□□□ -1.1
SLC1A1P43005 AC091808.1-201ENST00000438867 786 ntTSL 3 BASIC8.15□□□□□ -1.1
SLC1A1P43005 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC8.15□□□□□ -1.1
SLC1A1P43005 MED28P8-201ENST00000454831 521 ntBASIC8.15□□□□□ -1.1
SLC1A1P43005 FTH1P23-201ENST00000492727 550 ntBASIC8.15□□□□□ -1.1
SLC1A1P43005 OR7E129P-201ENST00000504655 968 ntBASIC8.15□□□□□ -1.1
SLC1A1P43005 GAPDHP61-201ENST00000507324 1005 ntBASIC8.15□□□□□ -1.1
SLC1A1P43005 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC8.15□□□□□ -1.1
SLC1A1P43005 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC8.15□□□□□ -1.1
SLC1A1P43005 ZNF345-205ENST00000526123 458 ntTSL 3 BASIC8.15□□□□□ -1.1
SLC1A1P43005 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SLC1A1P43005 COX4I1P1-201ENST00000554239 509 ntBASIC8.15□□□□□ -1.1
SLC1A1P43005 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC8.15□□□□□ -1.1
SLC1A1P43005 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC8.15□□□□□ -1.1
SLC1A1P43005 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC8.15□□□□□ -1.1
SLC1A1P43005 LINC02178-201ENST00000566876 425 ntTSL 3 BASIC8.15□□□□□ -1.1
SLC1A1P43005 AC027763.2-201ENST00000573755 539 ntTSL 4 BASIC8.15□□□□□ -1.1
SLC1A1P43005 AL133520.1-201ENST00000610430 700 ntBASIC8.15□□□□□ -1.1
SLC1A1P43005 AC008957.2-201ENST00000618632 396 ntTSL 5 BASIC8.15□□□□□ -1.1
SLC1A1P43005 MED15P6-202ENST00000621415 787 ntBASIC8.15□□□□□ -1.1
SLC1A1P43005 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
SLC1A1P43005 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SLC1A1P43005 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
SLC1A1P43005 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
SLC1A1P43005 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC8.15□□□□□ -1.11
SLC1A1P43005 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
SLC1A1P43005 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC8.15□□□□□ -1.11
SLC1A1P43005 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
SLC1A1P43005 AC011447.6-201ENST00000623510 2598 ntBASIC8.15□□□□□ -1.11
SLC1A1P43005 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SLC1A1P43005 SLC16A1P1-201ENST00000486743 1510 ntBASIC8.14□□□□□ -1.11
SLC1A1P43005 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC8.14□□□□□ -1.11
SLC1A1P43005 CREM-208ENST00000361599 2170 ntTSL 5 BASIC8.14□□□□□ -1.11
SLC1A1P43005 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SLC1A1P43005 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
SLC1A1P43005 LINC01747-203ENST00000634603 1377 ntTSL 4 BASIC8.14□□□□□ -1.11
SLC1A1P43005 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SLC1A1P43005 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC8.14□□□□□ -1.11
SLC1A1P43005 OR13H1-201ENST00000338616 927 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
SLC1A1P43005 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SLC1A1P43005 SNORA10B-201ENST00000384458 133 ntBASIC8.14□□□□□ -1.11
SLC1A1P43005 AC008770.1-201ENST00000406892 1257 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SLC1A1P43005 AC092042.2-201ENST00000417304 331 ntBASIC8.14□□□□□ -1.11
SLC1A1P43005 PPIAP25-201ENST00000420177 540 ntBASIC8.14□□□□□ -1.11
SLC1A1P43005 ARL17B-201ENST00000434041 798 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SLC1A1P43005 ARL17A-203ENST00000445552 798 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
SLC1A1P43005 AP1B1P1-202ENST00000448124 191 ntBASIC8.14□□□□□ -1.11
SLC1A1P43005 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC8.14□□□□□ -1.11
SLC1A1P43005 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC8.14□□□□□ -1.11
SLC1A1P43005 AC008629.3-201ENST00000505786 586 ntBASIC8.14□□□□□ -1.11
SLC1A1P43005 AC006499.1-201ENST00000511870 850 ntBASIC8.14□□□□□ -1.11
SLC1A1P43005 ADAM20P2-201ENST00000515830 1273 ntBASIC8.14□□□□□ -1.11
SLC1A1P43005 C11orf65-203ENST00000525729 1263 ntTSL 2 BASIC8.14□□□□□ -1.11
SLC1A1P43005 AC090589.2-201ENST00000532022 332 ntTSL 3 BASIC8.14□□□□□ -1.11
SLC1A1P43005 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC8.14□□□□□ -1.11
SLC1A1P43005 AC078950.1-204ENST00000540635 523 ntTSL 3 BASIC8.14□□□□□ -1.11
SLC1A1P43005 ANAPC15-213ENST00000543050 807 ntTSL 3 BASIC8.14□□□□□ -1.11
SLC1A1P43005 TMBIM6-225ENST00000552370 882 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
SLC1A1P43005 AC024270.1-201ENST00000559181 404 ntBASIC8.14□□□□□ -1.11
SLC1A1P43005 DNM1P34-202ENST00000567850 315 ntBASIC8.14□□□□□ -1.11
SLC1A1P43005 AC211469.1-201ENST00000604263 394 ntBASIC8.14□□□□□ -1.11
SLC1A1P43005 CU638689.2-201ENST00000623809 818 ntBASIC8.14□□□□□ -1.11
SLC1A1P43005 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC8.14□□□□□ -1.11
SLC1A1P43005 AC012557.3-201ENST00000626439 255 ntBASIC8.14□□□□□ -1.11
SLC1A1P43005 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
SLC1A1P43005 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.14□□□□□ -1.11
SLC1A1P43005 Z99129.4-201ENST00000624649 2435 ntBASIC8.14□□□□□ -1.11
SLC1A1P43005 CCR3-208ENST00000545097 1786 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SLC1A1P43005 AF131215.2-201ENST00000531549 1710 ntBASIC8.14□□□□□ -1.11
SLC1A1P43005 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
SLC1A1P43005 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC8.14□□□□□ -1.11
SLC1A1P43005 THAP12P1-201ENST00000398672 2203 ntBASIC8.14□□□□□ -1.11
SLC1A1P43005 AC008555.1-201ENST00000561778 2757 ntBASIC8.14□□□□□ -1.11
SLC1A1P43005 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
SLC1A1P43005 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
SLC1A1P43005 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
SLC1A1P43005 SLC2A14-215ENST00000542546 3120 ntTSL 5 BASIC8.14□□□□□ -1.11
SLC1A1P43005 GABRR3-203ENST00000621172 1521 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms