Protein–RNA interactions for Protein: Q9Y5F1

PCDHB12, Protocadherin beta-12, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12Q9Y5F1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
PCDHB12Q9Y5F1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PCDHB12Q9Y5F1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.73■■□□□ 1.07
PCDHB12Q9Y5F1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB12Q9Y5F1 TSPY15P-201ENST00000457163 923 ntBASIC21.73■■□□□ 1.07
PCDHB12Q9Y5F1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.73■■□□□ 1.07
PCDHB12Q9Y5F1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHB12Q9Y5F1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.73■■□□□ 1.07
PCDHB12Q9Y5F1 AL355075.4-201ENST00000554988 638 ntBASIC21.73■■□□□ 1.07
PCDHB12Q9Y5F1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PCDHB12Q9Y5F1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PCDHB12Q9Y5F1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB12Q9Y5F1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB12Q9Y5F1 AL137060.1-201ENST00000618151 2648 ntBASIC21.73■■□□□ 1.07
PCDHB12Q9Y5F1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB12Q9Y5F1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB12Q9Y5F1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB12Q9Y5F1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB12Q9Y5F1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHB12Q9Y5F1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB12Q9Y5F1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB12Q9Y5F1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.72■■□□□ 1.07
PCDHB12Q9Y5F1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB12Q9Y5F1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHB12Q9Y5F1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.72■■□□□ 1.07
PCDHB12Q9Y5F1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHB12Q9Y5F1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB12Q9Y5F1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB12Q9Y5F1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB12Q9Y5F1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB12Q9Y5F1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB12Q9Y5F1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB12Q9Y5F1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB12Q9Y5F1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB12Q9Y5F1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PCDHB12Q9Y5F1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB12Q9Y5F1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.71■■□□□ 1.07
PCDHB12Q9Y5F1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PCDHB12Q9Y5F1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB12Q9Y5F1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB12Q9Y5F1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB12Q9Y5F1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDHB12Q9Y5F1 AL121829.2-201ENST00000620908 328 ntBASIC21.71■■□□□ 1.07
PCDHB12Q9Y5F1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB12Q9Y5F1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PCDHB12Q9Y5F1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PCDHB12Q9Y5F1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB12Q9Y5F1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB12Q9Y5F1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB12Q9Y5F1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PCDHB12Q9Y5F1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PCDHB12Q9Y5F1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB12Q9Y5F1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB12Q9Y5F1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB12Q9Y5F1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHB12Q9Y5F1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB12Q9Y5F1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PCDHB12Q9Y5F1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB12Q9Y5F1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PCDHB12Q9Y5F1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB12Q9Y5F1 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHB12Q9Y5F1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
PCDHB12Q9Y5F1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHB12Q9Y5F1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHB12Q9Y5F1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHB12Q9Y5F1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PCDHB12Q9Y5F1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB12Q9Y5F1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHB12Q9Y5F1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB12Q9Y5F1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB12Q9Y5F1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB12Q9Y5F1 FBXW4P1-201ENST00000426721 2239 ntBASIC21.7■■□□□ 1.06
PCDHB12Q9Y5F1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB12Q9Y5F1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PCDHB12Q9Y5F1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB12Q9Y5F1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHB12Q9Y5F1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHB12Q9Y5F1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB12Q9Y5F1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB12Q9Y5F1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.69■■□□□ 1.06
PCDHB12Q9Y5F1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHB12Q9Y5F1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHB12Q9Y5F1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDHB12Q9Y5F1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB12Q9Y5F1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
PCDHB12Q9Y5F1 AC026471.5-201ENST00000615068 467 ntBASIC21.69■■□□□ 1.06
PCDHB12Q9Y5F1 AC097493.4-201ENST00000641197 219 ntBASIC21.69■■□□□ 1.06
PCDHB12Q9Y5F1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB12Q9Y5F1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB12Q9Y5F1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB12Q9Y5F1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB12Q9Y5F1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB12Q9Y5F1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB12Q9Y5F1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB12Q9Y5F1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB12Q9Y5F1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHB12Q9Y5F1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.68■■□□□ 1.06
PCDHB12Q9Y5F1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHB12Q9Y5F1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB12Q9Y5F1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms